@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VV36: (2017-12-21 )
MEYVDRHQGGERTILVSVSVQLLDDLDAEEFALLAQSAGADILEHIKVQRNKPDPKFFIGSGKVDEIAEQVQDLKASLVIFDHELTPAQERNLEKILKCRVIDRTGLILDIFAQRARTHEGKLQVELAQLKHLSTRLIRGWSADFEQQKGGIGLRGPGESQLETDRRLIRVRITQLKDKLEKVHQTRMQGRAARQKASIPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRRLEWDGIGTVVLADTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIKAVEGVLKEIGADAPVLRVYNKIDLSGEEAKIIYSEPRVPDRVYVSAHSGLGLDLLRQAVQECLMGQLQHFSLVLKPAYGKLRTQLYALNVIQSEHYDDEGLLHIDIRIAPHKLEQLIRQAKLPIDEILGERASQFKRPLEEFEIKH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_A_8(2QTH)
HFLX_SULSO
[Raw transfer]



GDP_A_3(3KXI)
HFLX_SULSO
[Raw transfer]
31 Fugue 90.2930% -52 - C1 -2QTH - HFLX_SULSO -
42 HHSearch 89.4628% -46 - C1 -3KXI - HFLX_SULSO -
41 HHSearch 86.1028% -39 - C1 -2QTF - HFLX_SULSO -
1 PsiBlast_PDB 81.0828% -7 - C1 -2QTF - HFLX_SULSO -
3 PsiBlast_PDB 80.2028% -2 - C1 -3KXI 5.0 HFLX_SULSO
2 PsiBlast_PDB 79.7928% -6 - C1 -2QTH 5.7 HFLX_SULSO
56 HHSearch 63.9727% -85 - C1 -5M04 - OBG_ECOLI -
5 PsiBlast_PDB 62.7530% -57 - C1 -2E87 - ? -
57 HHSearch 58.1223%-112 - C1 -4B43 - IF2_THET8 -
4 PsiBlast_PDB 58.0830% -80 - C1 -5M04 - OBG_ECOLI -
38 Fugue 57.9118% 30 - C1 -1UDX - OBG_THET8 -
36 Fugue 57.2617% 33 - C1 -1XZP - MNME_THEMA -
45 HHSearch 55.9223% 11 - C1 -3GEH - MNME_NOSS1 -
53 HHSearch 55.7727% -45 - C1 -2E87 - ? -
59 HHSearch 54.8927% -45 - C1 -1LNZ - OBG_BACSU -
6 PsiBlast_PDB 53.6630% -57 - C1 -1UDX - OBG_THET8 -
49 HHSearch 53.2322% - - C1 -4A9A - RBG1_YEAST -
10 PsiBlast_PDB 53.1928% -7 - C1 -3R9W - ERA_AQUAE -
46 HHSearch 53.0026% 40 - C1 -1XZP - MNME_THEMA -
33 Fugue 52.7920% -62 - C1 -1M2O - SAR1_YEAST -