@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VV42: (2017-12-22 )
MLPLYVTSGEPAGIGPDICLSLAKRVDERPVVVLADRNLLHQRAQKLGLDIKFLEYSGQAESSLQGELYIEHVPLETIVVDGQLNAANAAYVLEQLRRSADYAMSGKSVGVATAPVQKSVINDAGILFSGHTEYYQEFAGVERVVMMLATKTLRVALATTHLPLRDVADAITKERLHQVIDILLRDLKTKFKINDPRVLVCGLNPHAGEDGYLGREEIDTINPVLESYRSQGVKLSLSLPADTLFTPEHLKNADAVLAMYHDQGLPVLKSQGFGEAINITLGLPFIRTSVDHGTALSLAGTGLAKSSSLNVAADLALSLAAS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4TP_A_5(1PS6)
PDXA_ECOLI
[Raw transfer]



EOH_A_5(1YXO)
PDXA_PSEAE
[Raw transfer]



EOH_A_5(1YXO)
PDXA_PSEAE
[Raw transfer]
33 HHSearch 83.0559% -40 - C1 -1YXO 3.4 PDXA_PSEAE
2 PsiBlast_PDB 80.3158% -30 - C1 -1YXO 3.4 PDXA_PSEAE
35 HHSearch 79.4755% -31 * C1 *3LXY - PDXA_YERPE -
34 HHSearch 78.4557% -16 - C1 -1PTM - PDXA_ECOLI -
1 PsiBlast_PDB 78.2359% -37 - C1 -1PS6 3.4 PDXA_ECOLI
3 PsiBlast_PDB 78.1456% -29 - C1 -3LXY - PDXA_YERPE -
5 PsiBlast_PDB 78.0358% -33 - C1 -1PTM - PDXA_ECOLI -
20 PsiBlast_CBE 77.8659% -34 - C1 -1PS6 - PDXA_ECOLI -
6 PsiBlast_PDB 77.4357% -25 - C1 -1R8K - PDXA_SALTY -
4 PsiBlast_PDB 76.7858% -25 - C1 -1PS7 - PDXA_ECOLI -
40 HHSearch 61.3133% 8 - C1 -4JQP - ? -
36 HHSearch 59.3834% -4 - C- -2HI1 - PDXA2_SALTY -
39 HHSearch 58.4829% -2 - C1 -3TSN - PDXA_CAMJE -
37 HHSearch 58.4834% 4 - C- -2HI1 - PDXA2_SALTY -
7 PsiBlast_PDB 57.7634% 9 - C- -2HI1 - PDXA2_SALTY -
8 PsiBlast_PDB 56.1936% 30 - C1 -4JQP - ? -
21 PsiBlast_CBE 55.8836% 29 - C1 -4JQP - ? -
9 PsiBlast_PDB 54.0831% -68 - C1 -3TSN - PDXA_CAMJE -
18 PsiBlast_PDB 36.9443%-129 - C2 -4E4R - PTAS_STAAR -
46 HHSearch 34.2714% 9 - C1 -1VMI - EUTD_ECOLI -