@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U007: (2017-12-17 )
MFGKIGSLVKNCLNKFSFTKLRRNFIMPVVSGAEFLKAARKGGYAVGGFNTNNLEWTQAILEAAEAKQAPVLIQTSMGAAKYMGGYKICKDLITDLVEAMNITVPVAIHLDHGDYEAALECIELGYTSVMFDGSHLPFEENLKLAKDVVEKAHAKGISVECEVGSIGGEEDGIIGNGELADIEECKQMVATGIDYLACGIGNIHGQYPENWKGLAFDHLQAIADAVGPDMPLVLHGGSGIPQDQIEKAISMGISKVNVNTEFQLSFAAATRKYIERW

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PH4_A_5(3C56)
ALF_HELPY
[Raw transfer]



2FP_A_2(3ELF)
ALF_MYCTU
[Raw transfer]



TD4_A_3(3N9S)
?
[Raw transfer]



TD4_B_10(3N9S)
?
[Raw transfer]



PH4_B_6(3C56)
ALF_HELPY
[Raw transfer]



13P_A_8(3Q94)
?
[Raw transfer]



13P_A_8(3Q94)
?
[Raw transfer]



PGH_B_12(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_A_3(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_B_12(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_A_9(3C52)
ALF_HELPY
[Raw transfer]



PGH_A_5(4DEL)
ALF_MYCTU
[Raw transfer]



PGH_A_5(4DEL)
ALF_MYCTU
[Raw transfer]



CIT_A_3(5U7S)
?
[Raw transfer]



13P_A_2(3EKZ)
ALF_MYCTU
[Raw transfer]



13P_A_2(3EKL)
ALF_MYCTU
[Raw transfer]



G3P_A_4(3EKZ)
ALF_MYCTU
[Raw transfer]



8HC_A_4(4LV4)
ALF_MYCTU
[Raw transfer]
66 HHSearch 86.4853% -47 - C1 -3Q94 4.3 ?
1 PsiBlast_PDB 86.3551% -44 - C1 -3Q94 4.3 ?
75 HHSearch 84.9238% -48 - C1 -5U4N - ? -
71 HHSearch 84.0445% -56 - C1 -1RVG - ? -
2 PsiBlast_PDB 83.3250% -44 - C1 -4TO8 - ? -
67 HHSearch 82.9350% -42 - C1 -4TO8 - ? -
15 PsiBlast_PDB 82.5634% -77 - C1 -5U7S 3.9 ?
16 PsiBlast_PDB 82.1634% -47 - C1 -5U4N - ? -
12 PsiBlast_PDB 81.2538% -52 - C1 -3C56 4.6 ALF_HELPY
5 PsiBlast_PDB 80.9642% -40 - C1 -1RVG - ? -
68 HHSearch 80.3741% -37 - C1 -3N9S - ? -
73 HHSearch 80.1646% -42 - C1 -2FJK - ALF_THECA -
74 HHSearch 80.1041% -57 - C1 -2ISW - ? -
14 PsiBlast_PDB 79.8438% -32 - C1 -3N9S 5.6 ?
37 PsiBlast_CBE 79.5138% -53 - C1 -3C56 4.9 ALF_HELPY
31 PsiBlast_CBE 79.4338% -52 - C1 -3N9S 5.6 ?
11 PsiBlast_PDB 79.0738% -55 - C1 -3C52 3.9 ALF_HELPY
4 PsiBlast_PDB 78.4942% -24 - C1 -1RV8 - ? -
10 PsiBlast_PDB 78.1838% -56 - C1 -3C4U - ALF_HELPY -
39 PsiBlast_CBE 78.0934% -68 - C1 -5U7S - ? -
70 HHSearch 76.1738% -57 * C1 *1GVF 4.0 KBAY_ECOLI
30 PsiBlast_CBE 73.6138% -29 - C1 -1GVF 4.0 KBAY_ECOLI
9 PsiBlast_PDB 73.1038% -36 - C1 -1GVF 3.6 KBAY_ECOLI
20 PsiBlast_PDB 66.4931% -24 - C1 -3EKZ 3.5 ALF_MYCTU
19 PsiBlast_PDB 65.8131% -23 - C1 -3EKL 3.3 ALF_MYCTU
42 PsiBlast_CBE 63.1831% 6 - C1 -4DEL 4.1 ALF_MYCTU
41 PsiBlast_CBE 63.0831% -14 - C1 -4LV4 3.4 ALF_MYCTU
80 HHSearch 62.5330% -8 - C1 -4DEL 4.0 ALF_MYCTU