@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U178: (2017-12-19 )
MTDLLTKTRKINTLLQQKNTFDMQADLPYDKMAVTLGGILDSNTYIIGSDGVLLGYNERHDVNNERIKTMFVEKQFPESYTDTVAQLMKTEANIPITSDITAFPVESREKYPFGLTTVVPIFGAGERLGTIILSRMEQSFADDDLVLAEYGATVVGMQILYQKSRSIEADVRSATAVQMAINTLSYSELKAVQAIFEALDGDEGRLTASNIADSIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKVLNSRFKDELAKHSY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ILE_C_7(5LOE)
CODY_BACSU
[Raw transfer]



ILE_A_5(5LOE)
CODY_BACSU
[Raw transfer]



VAL_A_2(2HGV)
CODY_BACSU
[Raw transfer]



ILE_A_2(2B18)
CODY_BACSU
[Raw transfer]



ILE_A_2(2B18)
CODY_BACSU
[Raw transfer]



ILE_A_5(5LOE)
CODY_BACSU
[Raw transfer]



ILE_B_6(5LOE)
CODY_BACSU
[Raw transfer]



ILE_D_8(5LOE)
CODY_BACSU
[Raw transfer]
35 HHSearch 79.2157% -73 - C4 -5LOE 3.8 CODY_BACSU
23 PsiBlast_CBE 76.2557% 25 - C4 -5LOE 3.6 CODY_BACSU
22 PsiBlast_CBE 75.9157% 23 * C4 *5LOE 4.1 CODY_BACSU
5 PsiBlast_PDB 75.7548%-124 - C4 -5EY0 - CODY_STAA8 -
3 PsiBlast_PDB 75.7457% 24 - C4 -5LOE 3.8 CODY_BACSU
30 PsiBlast_CBE 75.3048%-120 - C4 -5EY0 - CODY_STAA8 -
21 PsiBlast_CBE 75.1057% 19 - C4 -5LOE 4.2 CODY_BACSU
4 PsiBlast_PDB 72.7855% 30 - C4 -5LNH - CODY_BACSU -
6 PsiBlast_PDB 72.2248%-119 - C4 -5EY1 - CODY_STAA8 -
1 PsiBlast_PDB 71.6057% 26 - C4 -5LOJ - CODY_BACSU -
2 PsiBlast_PDB 69.7457% 34 - C4 -5LOO - CODY_BACSU -
34 HHSearch 69.1947% -67 - C4 -5EY0 - CODY_STAA8 -
59 Fugue 57.7650%-120 - C4 -2B18 4.2 CODY_BACSU
29 PsiBlast_CBE 55.7048%-111 - C4 -5EY1 - CODY_STAA8 -
36 HHSearch 54.4149% -87 - C4 -2GX5 - CODY_BACSU -
9 PsiBlast_PDB 52.7474%-161 - C- -2B0L - CODY_BACSU -
7 PsiBlast_PDB 51.9550% -4 - C4 -2B18 4.2 CODY_BACSU
8 PsiBlast_PDB 51.8748% -3 - C4 -2HGV 3.9 CODY_BACSU
58 Fugue 51.6865%-142 - C- -2B0L - CODY_BACSU -
33 HHSearch 50.7856% 11 - C4 -5EY2 - CODY_BACCR -