@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U3H5: (2017-12-24 )
MSYKAEYERWLANANADIVEELRSYSEKDIEDSFYKNLSFGTGGLRGTIGAGTNRMNVHTVGKASQGLADYLNKTCEAPSVVVGYDSRLKSDVFAKTAADIFAANGIQVHLWPQLLPVSTVSFATRYLKADAGVMITASHNPSKYNGYKVYGTDGCQITTEAAAATLAEIEKLDVFADVKTGGDAAKIETIQPEVLTAFIEEVKGQSVLFGEEMDKNVAIVYSPLNGTGLVPVTRTLAEMGYSNVTVVEEQRLPDGNFPTCPYPNPEIKEAMSLGIEYAKKYNADLLLATDPDCDRVGIAVKNAEGDYVLLSGNETGLLLLDYICSQRTKHGKMPADPVMVKTIVTIDLGERIASNYGVRTIDVLTGFKFIGEQIGMLEKAGKAGSYIFGFEESYGYLSGSYVRDKDGVNGAHLICEMFSYYKNQGISLLDKLNEIYTKYGYCLNTLHSFEFDGAAGFTKMQEIMIEFHKGLDIIGGKKVVETLDYSKGLNGLPKSDVLKFMLEDNCSVVVRPSGTEPKLKTYISISAESKEAAEAMEAVIAAELAEMFM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G1P_X_2(1P5D)
ALGC_PSEAE
[Raw transfer]



G6P_X_2(1P5G)
ALGC_PSEAE
[Raw transfer]



M1P_X_2(1PCJ)
ALGC_PSEAE
[Raw transfer]



R1P_X_2(2H4L)
ALGC_PSEAE
[Raw transfer]



G1P_X_2(3BKQ)
ALGC_PSEAE
[Raw transfer]



M6P_X_3(1PCM)
ALGC_PSEAE
[Raw transfer]



X1P_X_3(2H5A)
ALGC_PSEAE
[Raw transfer]



G16_A_2(2FKF)
ALGC_PSEAE
[Raw transfer]



TLA_A_3(4MRQ)
ALGC_PSEAE
[Raw transfer]
22 Fugue 87.5822% -81 - C1 -1K2Y - ALGC_PSEAE -
36 HHSearch 83.9922% -78 - C1 -2F7L - ? -
41 HHSearch 81.4522% -72 - C1 -4MRQ - ALGC_PSEAE -
34 HHSearch 80.7422% -70 - C1 -1P5D - ALGC_PSEAE -
47 HHSearch 78.2825% -52 - C1 -1TUO - ? -
44 HHSearch 75.9021% -80 - C1 -3I3W - GLMM_FRATT -
17 PsiBlast_PDB 75.8925% 1 - C1 -3OLP - ? -
35 HHSearch 75.1923% -7 - C1 -2FUV - ? -
45 HHSearch 73.8721% -79 - C1 -3I3W - GLMM_FRATT -
16 PsiBlast_PDB 71.6725% -8 * C1 *2F7L - ? -
51 HHSearch 71.0624% -29 - C1 -5BMP - ? -
50 HHSearch 68.5824% -29 - C1 -5BMN - ? -
39 HHSearch 67.7623% 0 - C1 -2Z0F - ? -
49 HHSearch 67.5925% 4 - C1 -1WQA - ? -
1 PsiBlast_PDB 67.3926% 12 - C1 -1WQA - ? -
40 HHSearch 66.9523% -2 - C1 -2Z0F - ? -
33 HHSearch 65.7521% -6 - C1 -5JN5 - PGM1_HUMAN -
32 HHSearch 64.6720% -2 - C1 -3PMG - PGM1_RABIT -
48 HHSearch 63.8720% -10 - C1 -3UW2 - ? -
43 HHSearch 63.0619% -6 - C1 -4QG5 - ? -