@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XX73: (2018-01-02 )
MEKVLVIVGPTAVGKTALSVELAQLFGGEIISGDSLQIYKNLDIGTAKIKEEEMNNVPHHLIDVIEPTQRYSAADFQHSGRQLITEIANRGHLPIIAGGTGLYIQSLLYDYQLGATEEANPEIRKKYETLAETIGSQALWNQLKEKDPAAAEKIHWNNQRKVIRALEVLETTGHSITAPKEEPKQLYDYLMIGLDTKRSILYERINQRVDLMLAEGLVAEARKVYELGEVQASQGIGYKEFFPYFEGKETLEEATEQVKLHSRRYAKRQLTWFRNRLDAQWFDLISEPNQKSQIEQTIKKWLEAE

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DPO_A_3(3CRQ)
MIAA_PSEAE
[Raw transfer]



DPO_A_4(3CRR)
MIAA_PSEAE
[Raw transfer]



PPV_A_10(3EPH)
MOD5_YEAST
[Raw transfer]



PPV_B_17(3EPH)
MOD5_YEAST
[Raw transfer]



DST_A_5(2ZXU)
MIAA_ECOLI
[Raw transfer]



DST_A_5(2ZXU)
MIAA_ECOLI
[Raw transfer]



DST_B_6(2ZXU)
MIAA_ECOLI
[Raw transfer]



DMA_A_6(3EPL)
MOD5_YEAST
[Raw transfer]



DMA_B_10(3EPL)
MOD5_YEAST
[Raw transfer]



TRS_A_5(3CRR)
MIAA_PSEAE
[Raw transfer]



TRS_A_5(3CRR)
MIAA_PSEAE
[Raw transfer]
39 HHSearch 84.8750% -79 - C1 -3EXA - MIAA_BACHD -
40 HHSearch 83.6650% -76 - C1 -3EXA - MIAA_BACHD -
2 PsiBlast_PDB 79.3650% -75 - C1 -3EXA - MIAA_BACHD -
37 HHSearch 77.5245% -40 - C1 -3D3Q - MIAA_STAES -
38 HHSearch 75.8445% -39 - C1 -3D3Q - MIAA_STAES -
42 HHSearch 75.7437% -54 - C1 -2ZXU 4.4 MIAA_ECOLI
43 HHSearch 75.0337% -58 - C1 -3FOZ - MIAA_ECOLI -
4 PsiBlast_PDB 74.0936% -58 - C1 -3FOZ - MIAA_ECOLI -
6 PsiBlast_PDB 73.7136% -60 - C1 -2ZM5 - MIAA_ECOLI -
5 PsiBlast_PDB 73.5236% -58 - C1 -2ZXU 4.9 MIAA_ECOLI
3 PsiBlast_PDB 73.0144% -30 - C1 -3D3Q - MIAA_STAES -
22 PsiBlast_CBE 72.4036% -55 - C1 -2ZXU 3.5 MIAA_ECOLI
27 Fugue 70.4933% -35 - C1 -3EPH - MOD5_YEAST -
44 HHSearch 69.4236% -49 - C1 -3EPH - MOD5_YEAST -
10 PsiBlast_PDB 69.0934% -49 - C1 -3EPH 3.9 MOD5_YEAST
26 PsiBlast_CBE 68.9934% -50 - C1 -3EPH 2.8 MOD5_YEAST
1 PsiBlast_PDB 68.5350% -71 - C1 -2QGN - MIAA_BACHD -
24 PsiBlast_CBE 68.2734% -48 - C1 -3EPK - MOD5_YEAST -
12 PsiBlast_PDB 67.7634% -49 - C1 -3EPK - MOD5_YEAST -
11 PsiBlast_PDB 67.6834% -48 - C1 -3EPJ - MOD5_YEAST -
13 PsiBlast_PDB 66.3634% -46 - C1 -3EPL 2.2 MOD5_YEAST
23 PsiBlast_CBE 66.0334% -48 - C1 -3EPL 3.7 MOD5_YEAST
41 HHSearch 63.0335% -76 - C1 -3CRR 3.0 MIAA_PSEAE
9 PsiBlast_PDB 60.1433% -52 - C1 -3CRR 4.1 MIAA_PSEAE