@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXZ1: (2018-01-06 )
MIVIMKKEATEEQIKKVVDHIEKEGFKVSIDQGTERVVIGLKGDTRSLQEGAFTRYEGVENAVRILNTYKLTSREFHPGNTVVDVDGVKIGDGSFVTMAGPCSIEGLDQIRECARMAKAGGAKILRGGAFKPRTSPYAFQGLEEEGLKYIRQAADEFGMKVITEVMDEGHIDMVAEYSDILQIGARNMQNFKLLSAVGKTGKPVGLKRGISGTINEWLNAAEYIAVEDKSPVIFIERGIRTYETATRNTFDLSAVPLMKKLTHFPVIVDPSHGTGIWELVPPMARAGVASGADGMIVEIHPDPANAWSDGPQSLNEKTYSRMMKEVAIMKEAMEKIQTLD

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEP_C_11(1VS1)
?
[Raw transfer]



PEP_B_10(1VS1)
?
[Raw transfer]



PEP_B_10(1VS1)
?
[Raw transfer]



PEP_A_9(1VS1)
?
[Raw transfer]



PEP_D_12(1VS1)
?
[Raw transfer]



PEP_D_12(1VS1)
?
[Raw transfer]



PEP_A_4(3TFC)
?
[Raw transfer]



E4P_B_9(1RZM)
AROF_THEMA
[Raw transfer]



PEP_B_7(3TFC)
?
[Raw transfer]



PEP_B_7(1ZCO)
?
[Raw transfer]



E4P_A_8(1RZM)
AROF_THEMA
[Raw transfer]



E4P_A_8(1RZM)
AROF_THEMA
[Raw transfer]



PEP_A_6(1ZCO)
?
[Raw transfer]
26 PsiBlast_CBE 97.8452%-103 - C5 -3PG9 - AROF_THEMA -
24 PsiBlast_CBE 96.3152%-104 - C5 -3PG9 - AROF_THEMA -
21 PsiBlast_CBE 96.0352%-101 - C5 -3PG9 - AROF_THEMA -
2 PsiBlast_PDB 96.0052%-101 - C5 -3PG9 - AROF_THEMA -
3 PsiBlast_PDB 95.8752%-104 - C- -1VR6 - AROF_THEMA -
25 PsiBlast_CBE 95.3852%-103 - C5 -3PG9 - AROF_THEMA -
27 PsiBlast_CBE 95.2352% -99 - C5 -3PG9 - AROF_THEMA -
23 PsiBlast_CBE 95.0252%-103 - C5 -3PG9 - AROF_THEMA -
22 PsiBlast_CBE 94.9152%-102 - C5 -3PG9 - AROF_THEMA -
58 HHSearch 94.6552%-104 - C- -1VR6 - AROF_THEMA -
1 PsiBlast_PDB 94.6052% -95 - C5 -1RZM 2.3 AROF_THEMA
28 PsiBlast_CBE 94.4252% -99 - C5 -1RZM 3.0 AROF_THEMA
59 HHSearch 94.0852% -97 - C5 -3PG9 - AROF_THEMA -
31 PsiBlast_CBE 93.5154%-106 - C5 -4GRS - AROF_THEMA -
4 PsiBlast_PDB 93.4554%-109 - C5 -4GRS - AROF_THEMA -
78 Fugue 92.8351% -92 - C5 -1RZM 2.3 AROF_THEMA
30 PsiBlast_CBE 92.6554%-107 - C5 -4GRS - AROF_THEMA -
29 PsiBlast_CBE 91.9554%-108 - C5 -4GRS - AROF_THEMA -
5 PsiBlast_PDB 82.3352% -96 - C5 -5J6F - ? -
6 PsiBlast_PDB 81.6655% -90 - C5 -4C1K - ? -
60 HHSearch 81.5754% -84 - C5 -1VS1 5.3 ?
61 HHSearch 81.0954% -88 - C5 -1VS1 5.7 ?
37 PsiBlast_CBE 80.6155% -98 - C5 -1ZCO 4.8 ?
42 PsiBlast_CBE 80.0657% -90 - C5 -1VS1 4.7 ?
41 PsiBlast_CBE 80.0057% -89 - C5 -1VS1 5.2 ?
43 PsiBlast_CBE 79.8257% -91 - C5 -1VS1 5.7 ?
7 PsiBlast_PDB 79.3355% -93 - C5 -1ZCO 3.4 ?
11 PsiBlast_PDB 78.4857% -86 - C5 -1VS1 5.2 ?
10 PsiBlast_PDB 74.5952% -94 - C5 -3TFC 4.8 ?
39 PsiBlast_CBE 74.2852% -92 - C5 -3TFC 4.9 ?