@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZ56: (2018-01-12 )
MNIIKIRHPYQSEQIPEDDVVLVLGFFDGVHIGHQKVIKTGMEIAQKEGLKLALMTFNQHPSIVFKKIDPSSVKYLTSLKQKEEKMAALGIDYLYEVDFTSSFAHLAPQEFVDQYIVGLHAKYAVSGFDYTYGPKDIADVAHFPEYAKGRFKIVTVSKEEEQGEKISSTRIRGLLDSGQVKEAAKLLGCTYEVEGVVVHGDARGRLLGFPTANVKVKSTVHLPKEGVYVSEIKIGETWYPAMGSIGHNDTFGEGRELTVELYILDFNQDIYGEHVAVRWNQFLRDQVKFSSVEELIEQLKEDEQATAEYFSQQ

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEG_A_6(3OP1)
?
[Raw transfer]



FMN_A_3(5A8A)
RIBF_CORAM
[Raw transfer]



LUM_B_5(1S4M)
?
[Raw transfer]



RBF_D_4(1T6Z)
?
[Raw transfer]



LUM_A_4(1S4M)
?
[Raw transfer]



FMN_E_5(1T6Y)
?
[Raw transfer]



GOL_D_17(5A88)

[Raw transfer]



GOL_B_17(3OP1)
?
[Raw transfer]



ADP_C_3(1T6X)
?
[Raw transfer]



ADP_C_3(1T6Y)
?
[Raw transfer]
1 PsiBlast_PDB 95.4941%-116 - C6 -3OP1 - ? -
3 PsiBlast_PDB 81.0633% -10 - C6 -4UZF - RIBF_CORAM -
22 PsiBlast_CBE 80.4833% -12 - C6 -4UZF - RIBF_CORAM -
6 PsiBlast_PDB 80.2232% -8 - C6 -3ZUG - RIBF_CORAM -
41 HHSearch 80.1341% -2 - C6 -3OP1 2.1 ?
5 PsiBlast_PDB 80.0033% -13 - C6 -5FO0 - RIBF_CORAM -
21 PsiBlast_CBE 79.9833% -8 - C6 -4UZE - RIBF_CORAM -
23 PsiBlast_CBE 79.6933% -9 - C6 -2X0K - RIBF_CORAM -
2 PsiBlast_PDB 79.4733% -9 - C6 -4UZE - RIBF_CORAM -
4 PsiBlast_PDB 79.4133% -7 - C6 -2X0K - RIBF_CORAM -
24 PsiBlast_CBE 79.3033% -10 - C6 -5FO0 - RIBF_CORAM -
26 PsiBlast_CBE 78.3532% -16 - C6 -5FNZ - RIBF_CORAM -
27 PsiBlast_CBE 78.2132% -11 - C6 -5FO1 - RIBF_CORAM -
39 HHSearch 78.0733% -24 * C6 *5FO1 - RIBF_CORAM -
8 PsiBlast_PDB 77.5832% -8 - C6 -5FO1 - RIBF_CORAM -
7 PsiBlast_PDB 77.3832% -6 - C6 -5FNZ - RIBF_CORAM -
40 HHSearch 76.7441% 0 - C6 -3OP1 - ? -
43 HHSearch 69.8530% -55 - C6 -1S4M 4.4 ?
31 PsiBlast_CBE 69.2333% -62 - C6 -1S4M 4.7 ?
59 Fugue 69.0626% -95 - C6 -1MRZ - ? -
35 PsiBlast_CBE 50.1138% -57 - C6 -5A88 3.3