@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZR1: (2018-01-16 )
MYTKLLQAIYRDSDLSEKTASMIEQKVSVYQQKKGQAGKLHWDEEDIFLITYGDQFFEEQQPTLRTFKKFYQKYLADTFRVVHFLPFFPYTSDDGFSVVNYQAINDRLGTWEDIEEMRSETRLMFDFVCNHMSAESTWFQEYLNLNDTYKDFFIDLPLDTDTSSVTRPRTSPLLTTFIDKNGKEKHVWTTFSEDQVDLNFKNPEVLLKMIDILLFYLEKGASFIRLDAVGFLWKELGTSCIHLPETHKIIQLFRAIADEAAPGTVLITETNVPHKDNISYFGNGENEAQMVYQFSLPPLTLQAIRSGNTSKLKEWLKTIDFASKKTTFFNFLASHDGIGLNPVRGILPEKTILELVEQLKKEGARVNYKKNPDGTTSPYEINATYLDALSSPTDTTEWRSKRFLAAHSFLVTLPGVPAIYIQSVLGSRNDYKGVEKTGENRKINRQKFLLADIEKELQTDPLRTAVYGELTQMLSIRKKEKAFHPNSLIYLLDSADSFISFIREAKEEKVLVIHNFSNQSAGYLLPKGDYLDLFSGQIIHCSQERKLIFQPYEYMWLKIIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OTU_A_3(3UEQ)
AMYS_NEIPO
[Raw transfer]



SUC_A_4(1ZS2)
AMYS_NEIPO
[Raw transfer]



SUC_C_3(2GDU)
?
[Raw transfer]



BGC_B_2(5C8B)
?
[Raw transfer]



GOL_A_9(4FLR)
AMYS_NEIPO
[Raw transfer]



GLC_A_4(2GDV)
?
[Raw transfer]



TRS_A_2(4FLQ)
AMYS_NEIPO
[Raw transfer]



GOL_A_18(4FLR)
AMYS_NEIPO
[Raw transfer]



TRS_A_2(5N7J)
?
[Raw transfer]



GLC_A_2(3CZG)
?
[Raw transfer]



BGC_A_2(1S46)
AMYS_NEIPO
[Raw transfer]
29 HHSearch 89.1024% -20 - C1 -3CZG 2.5 ?
30 HHSearch 86.8323% -25 - C1 -2WPG - ? -
27 HHSearch 85.9725% -5 - C1 -1ZS2 4.4 AMYS_NEIPO
28 HHSearch 85.4025% -4 - C1 -1G5A - AMYS_NEIPO -
36 HHSearch 78.1924% 16 - C1 -4TVU - ? -
40 HHSearch 77.7623% 17 - C1 -5JY7 - ? -
35 HHSearch 76.9524% 17 * C1 *4WF7 - ? -
48 Fugue 76.8124% 20 - C1 -1G5A - AMYS_NEIPO -
52 Fugue 75.6019% -4 - C1 -1BVZ - NEPU2_THEVU -
41 HHSearch 75.3723% 14 - C1 -3ZO9 - TRES_MYCS2 -
8 PsiBlast_PDB 74.3226% 10 - C1 -1MW2 - AMYS_NEIPO -
11 PsiBlast_PDB 74.2726% 9 - C1 -5N7J 3.3 ?
15 PsiBlast_PDB 73.8426% 6 - C1 -4FLQ 3.0 AMYS_NEIPO
6 PsiBlast_PDB 73.6626% 9 - C1 -1JG9 - AMYS_NEIPO -
43 HHSearch 73.6121% 26 - C1 -5BRP - ? -
16 PsiBlast_PDB 73.2926% 7 - C1 -4FLO - AMYS_NEIPO -
12 PsiBlast_PDB 73.2626% 9 - C1 -4FLR 3.2 AMYS_NEIPO
10 PsiBlast_PDB 73.1426% 10 - C1 -3UEQ 3.5 AMYS_NEIPO
5 PsiBlast_PDB 72.8226% 10 - C1 -1G5A - AMYS_NEIPO -
7 PsiBlast_PDB 72.7126% 11 - C1 -1MW1 - AMYS_NEIPO -