@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZT7: (2018-01-16 )
MEIKTIIEAIDDWGINEPDRVAYQADETHTFGELKQASDALAYYLEKKVEGDGPIVVFGNLEFEMIVSFLGVVKSGHAYLPIEEHTPKERILSIFRVAKPSMVISIGDWIEDIPSVPVITKKEFQEIKKIPVGFYPRNSVKGTENFYIIFTSGTTGEPKGVQISHDNLVSFVQWTMEDFGIKPGMHFLAQAPFSFDLSVFSIYPALVSGGMLKPLNKAVVQDFRQLFATLPALKLNVWVSTPSFMDICLMEPTFNGENVPELDMFLFCGEELTKKTAESLLDRFPNARIYNTYGPTEATVAISSIQIDQHVLDSYDRLPIGYVKKDTKVSIVQEGKPVSKGETGEIIIAGPSVSKGYLNNPEKTAAAFFCQNDLASYHTGDAGRLDEYGLLFYEGRMDQQVKLHGYRIELGDIEHYLLQDNRIKQAVVVPKYQGTKVQQLVAFVVLENKTKQPDFQLTKSIKEQLLEVVMDYMIPQKFHYVDLLPQTVNGKIDRKKLTAEVNPE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FCE)
DLTA_BACCR
[Raw transfer]



GAP_A_2(4OXI)
?
[Raw transfer]



AMP_A_9(1AMU)
GRSA_ANEMI
[Raw transfer]



AMP_A_2(3E7X)
DLTA_BACSU
[Raw transfer]



MJ8_A_3(5U89)
?
[Raw transfer]



AMP_A_3(3E7W)
DLTA_BACSU
[Raw transfer]



APC_A_4(5ES7)
LGRA_BREPA
[Raw transfer]



GOL_B_23(3ETC)
?
[Raw transfer]



GOL_B_21(3ETC)
?
[Raw transfer]
22 PsiBlast_CBE 83.3246% 9 - C3 -3LGX - DLTA_STRP1 -
21 PsiBlast_CBE 82.9046% 9 - C3 -3LGX - DLTA_STRP1 -
23 PsiBlast_CBE 82.7146% 9 - C3 -3LGX - DLTA_STRP1 -
44 HHSearch 82.7045% 11 - C3 -3E7X 6.5 DLTA_BACSU
43 HHSearch 82.5445% 6 - C3 -3E7W 7.0 DLTA_BACSU
2 PsiBlast_PDB 82.5446% 10 - C3 -3LGX - DLTA_STRP1 -
40 HHSearch 82.4446% -0 - C3 -3FCE 8.0 DLTA_BACCR
3 PsiBlast_PDB 82.4046% 3 - C3 -3DHV - DLTA_BACCR -
8 PsiBlast_PDB 82.3044% 9 - C3 -3E7X - DLTA_BACSU -
7 PsiBlast_PDB 81.9744% 5 - C3 -3E7W - DLTA_BACSU -
6 PsiBlast_PDB 81.1546% 6 - C3 -3FCE - DLTA_BACCR -
5 PsiBlast_PDB 80.7146% 6 - C3 -3FCC - DLTA_BACCR -
4 PsiBlast_PDB 80.5846% -7 - C3 -4PZP - DLTA_BACCR -
51 HHSearch 70.9324% -28 - C3 -4OXI 7.5 ?
13 PsiBlast_PDB 67.6630% 12 - C3 -4D57 - ? -
27 Fugue 67.6025% -7 - C3 -4DG9 - ? -
20 PsiBlast_PDB 66.9228% -9 - C3 -2VSQ - -
9 PsiBlast_PDB 66.5630% 15 - C3 -4D4G - ? -
12 PsiBlast_PDB 66.0530% 13 - C3 -4D56 - ? -
11 PsiBlast_PDB 65.7630% 15 - C3 -4D4I - ? -