@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0D0: (2018-01-20 )
MRKMKTMDGNTAAAYISYAFTEIAAIYPITPSSTMAELVDQWSAAGKENVFGQPVKVVEMQSEAGAAGVVHGSLKTGALTTTYTASQGLLLMIPNMYKIAGELLPSVFHVASRAVTTNALNIFGDHGDVMAARQTGFAMLAESSVQEVMDLAPVAHLASIEGEVPFLNFFDGFRTSHEIQKIEVLEYEELAPLINQEKLASFRKRGMNPNHPTVSGTNQNPDIHFQQRETINPYYDKLPEIVQKYMKEINRLRGTSYDLVTYYGADDAEEVIVSMGSVAQTIEQTIDYLNANGRKTGFLNIHLYRPFPVETFVQKLPHTVKTIAVLDRSKEPGAGGEPLLLDVQSALYDSELRPAVIGGRYGLGSKDVTPDQISAVFDELKKDPSIRKKRFTIGIVDDVTYQSLEPKESLDLTEPQTFQAKFWGFGSDGTVGANKSAIKIIGDHTDKYAQGYFYYDSKKSGGLTVSHLRFGDTPIRSAYLVEHADLVACHTPAYLHSYDLVKGLKPGGIFLLNTLWSDEQLETHLPLKLKRYLAENNIRFYTINAMRLAQEVGLGRRINTAMETAFFKLADIIPFDEVLPLLKEEALKSYGHKSMAIVEKNIQAIDRTTELLHQVAIPDHWRTLEMPEKINKRNTGYIQEILEPVNAQEGNQLSVGTLVANGMTTGEMPLGTASMEKRGVALEVPEWISDRCTMCNECAFVCPHAAIRPFLADEEEMEEAPEGFIVREMRGADGVKYRIQVSVEDCTGCGLCVEACPAKEKALVMKPYEEQKEQAVNWAFAMTLRQKANPVKGKNTVLSTQFNQPLLEFSGACSGCGETPYVKLLTQMFGDRMMIANATGCSSIWGGASPASPYTTNECGQGPAWSNSLLEDNAEFGYGMLLAAQTRREALASSIKEVLPKVSEELRELMEDWLVHMFESEGTQQRAAKLQAAIESERSIFPELEDIYKRKDLFVKNSQWMIGGDGWAYDIGFGGIDHVLASGADVNILVLDNEVYSNTGGQTSKATPASAIAKFSASGKYASKKDLGMMAMTYGNVYVAQIASGANQMQTIKAFEEAEKYPGPSLIIAYTPCITHGLLGGMKESLKEAKEAVSSGYWSLYRYNPTMVEKNKNPMTLDYKKPDFSAMPDFMRKQVRFSSLDNANPNLAKALFEKTVHDAKTRFYNYAALTGELEKIKKRLEPEESIDVPVKTRKEKTTDLEAEERRAARRAARAERRKKMEQATKEKKEK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SF4_B_3(5B46)
?
[Raw transfer]
60 HHSearch 65.2853% -21 * C1 *2C42 - POR_DESAF -
23 PsiBlast_CBE 65.2653% -22 - C1 -2C42 - POR_DESAF -
26 PsiBlast_CBE 65.2353% -22 - C1 -2C3P - POR_DESAF -
29 PsiBlast_CBE 64.7753% -21 - C1 -1KEK - POR_DESAF -
21 PsiBlast_CBE 64.7553% -22 - C1 -2UZA - POR_DESAF -
1 PsiBlast_PDB 64.7253% -21 - C1 -1B0P - POR_DESAF -
59 HHSearch 64.7053% -21 - C1 -2UZA - POR_DESAF -
4 PsiBlast_PDB 64.7053% -22 - C1 -2C3M - POR_DESAF -
6 PsiBlast_PDB 64.6553% -22 - C1 -2C3P - POR_DESAF -
9 PsiBlast_PDB 64.6453% -23 - C1 -2C42 - POR_DESAF -
28 PsiBlast_CBE 64.6053% -22 - C1 -2C3M - POR_DESAF -
3 PsiBlast_PDB 64.5453% -22 - C1 -1KEK - POR_DESAF -
10 PsiBlast_PDB 64.4753% -22 - C1 -2UZA - POR_DESAF -
30 PsiBlast_CBE 64.4353% -21 - C1 -1B0P - POR_DESAF -
8 PsiBlast_PDB 64.2753% -22 - C1 -2C3Y - POR_DESAF -
27 PsiBlast_CBE 64.2653% -24 - C1 -2C3O - POR_DESAF -
24 PsiBlast_CBE 64.2353% -23 - C1 -2C3Y - POR_DESAF -
25 PsiBlast_CBE 64.2253% -22 - C1 -2C3U - POR_DESAF -
7 PsiBlast_PDB 64.0953% -22 - C1 -2C3U - POR_DESAF -
2 PsiBlast_PDB 63.5853% -21 - C1 -2PDA - POR_DESAF -