@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0G3: (2018-01-20 )
MDTLEQIKGGVVVSCQALENEPLHSSFIMGRMALAAKEGGAVGIRANTTEDINEIKRIVDLPVIGIIKRDYDGSEVFITATEKEVEELLETQAEIIALDATSRKRPTEKTTAELVQMIHEHGRLAMADISTFEEALQAQEDGFDLLSTTLAGYTEYSRKTQTPDFDLLNQIIEQVDIPVIMEGHTDSPEQVEKAYELGAFSVVVGSIITRPQLITKRYVEAASKANN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RFW_A_6(4UTW)
NANE_CLOPE
[Raw transfer]




RFW_C_10(4UTW)
NANE_CLOPE
[Raw transfer]




RFW_D_12(4UTW)
NANE_CLOPE
[Raw transfer]




LRY_B_5(4UTU)
NANE_CLOPE
[Raw transfer]




RFW_B_8(4UTW)
NANE_CLOPE
[Raw transfer]




LRY_A_3(4UTU)
NANE_CLOPE
[Raw transfer]




LRY_B_5(4UTU)
NANE_CLOPE
[Raw transfer]




16G_A_3(3IGS)
NANE2_SALTY
[Raw transfer]




PEG_A_3(3Q58)
NANE_SALTI
[Raw transfer]




27 PsiBlast_CBE 83.6859%-103 - C1 -4UTU 5.3 NANE_CLOPE
3 PsiBlast_PDB 83.5959%-102 - C1 -4UTU 4.9 NANE_CLOPE
65 HHSearch 83.5859%-103 - C1 -4UTU 5.3 NANE_CLOPE
23 PsiBlast_CBE 83.4359%-102 - C1 -4UTW 4.2 NANE_CLOPE
24 PsiBlast_CBE 83.2159%-101 - C1 -4UTW 3.9 NANE_CLOPE
2 PsiBlast_PDB 82.3859%-102 - C1 -4UTT - NANE_CLOP1 -
21 PsiBlast_CBE 82.1759%-102 - C1 -4UTW 3.9 NANE_CLOPE
1 PsiBlast_PDB 82.1559% -99 - C1 -4UTW 3.7 NANE_CLOPE
59 HHSearch 80.0460% -96 - C1 -4UTT - NANE_CLOP1 -
57 HHSearch 77.0356% -54 - C1 -1Y0E - NANE_STAAN -
4 PsiBlast_PDB 73.2655% -54 - C1 -1Y0E - NANE_STAAN -
6 PsiBlast_PDB 71.1738%-115 * C1 *3IGS 2.3 NANE2_SALTY
58 HHSearch 68.6649% 13 - C1 -1YXY - NANE_STRP1 -
7 PsiBlast_PDB 67.5236%-108 - C1 -3Q58 2.5 NANE_SALTI
5 PsiBlast_PDB 67.4749% 12 - C1 -1YXY - NANE_STRP1 -
60 HHSearch 66.0840% 31 - C1 -3IGS - NANE2_SALTY -
70 HHSearch 45.0423% -10 - C1 -5LSM - ? -
81 Fugue 42.5516% 39 - C1 -2GJL - 2NPD_PSEAE -
16 PsiBlast_PDB 42.2438%-239 - C1 -1XM3 - THIG_BACSU -
66 HHSearch 42.0321% 38 - C1 -2Z6I - ? -