@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0S5: (2018-01-22 )
MKTAFLFSGQGAQYQGMGKDLYEEAVVKQTFDEASEILGYDMAELCFTENERLDQTQYTQPAILTVSIAYYRLLKEHGIIPDAALGLSLGEYSALVASNALSFTEAVALVAKRGAYMTEAAPAGSGKMVAVMNAPIETIEESCHEASKYGIVSPANYNTPQQIVIGGEEKAVDEAVLLLKEKGFKRMIPLNVSGPFHTAILEPAAKKLAKDLSQIQFSEPSFPIISNTTTEIMKKETIAGLLEQQVMQPVRFYESIHKLKTIGIEQVIEVGPGKVLSGFMKKIDKTIPVLRVENKQTFDETIAIL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_2(2G1H)
FABD_ECOLI
[Raw transfer]



NHE_A_2(3R97)
?
[Raw transfer]



GOL_B_2(2G1H)
FABD_ECOLI
[Raw transfer]



GLY_A_2(3TQE)
?
[Raw transfer]



GOL_A_2(3K89)
?
[Raw transfer]



GOL_A_2(3K89)
?
[Raw transfer]



GOL_A_2(5DZ6)
PKSC_BACSU
[Raw transfer]



COZ_B_2(2G2Z)
FABD_ECOLI
[Raw transfer]



CXS_A_14(3HJV)
?
[Raw transfer]



ACY_A_4(1NM2)
?
[Raw transfer]



MLA_C_3(2G2Z)
FABD_ECOLI
[Raw transfer]



GOL_A_4(5DZ7)
PKSE_BACSU
[Raw transfer]



ACY_A_2(2QC3)
FABD_MYCTU
[Raw transfer]
1 PsiBlast_PDB 83.9062% 0 - C1 -3IM8 - ? -
9 PsiBlast_PDB 74.6942% -24 - C1 -2G2Y - FABD_ECOLI -
43 HHSearch 74.6640% -12 * C1 *2G1H 3.1 FABD_ECOLI
8 PsiBlast_PDB 73.9742% -24 - C1 -2G2O - FABD_ECOLI -
7 PsiBlast_PDB 73.2542% -23 - C1 -2G1H 3.1 FABD_ECOLI
10 PsiBlast_PDB 72.8542% -24 - C1 -2G2Z 3.4 FABD_ECOLI
3 PsiBlast_PDB 72.5043% -16 - C1 -3HJV 2.6 ?
11 PsiBlast_PDB 72.4742% -22 - C1 -1MLA - FABD_ECOLI -
13 PsiBlast_PDB 72.0340% -17 - C1 -3TQE 3.2 ?
17 PsiBlast_PDB 70.7034% -69 - C1 -4RR5 - FABD_SYNY3 -
46 HHSearch 70.2234% -73 - C1 -4RR5 - FABD_SYNY3 -
14 PsiBlast_PDB 68.9140% -18 - C1 -3H0P - FABD_SALTY -
38 HHSearch 67.4339% -17 - C1 -3K89 3.0 ?
21 PsiBlast_CBE 66.1235% 5 - C1 -3QAT - ? -
4 PsiBlast_PDB 65.9338% -20 - C- -3EZO - ? -
15 PsiBlast_PDB 65.8935% 3 - C1 -3QAT - ? -
2 PsiBlast_PDB 65.6545% - - C1 -3PTW - ? -
47 HHSearch 65.5139% 4 - C1 -3IM9 - FABD_STAAM -
39 HHSearch 65.0436% 2 - C1 -3QAT - ? -
5 PsiBlast_PDB 64.1040% -30 - C1 -3K89 3.0 ?
6 PsiBlast_PDB 63.8340% -30 - C1 -3R97 2.9 ?
18 PsiBlast_PDB 60.7437% -23 - C1 -5DZ7 2.2 PKSE_BACSU
19 PsiBlast_PDB 59.9637% -29 - C1 -5DZ6 2.7 PKSC_BACSU