@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : HDA10_HUMAN: (2017-06-15 )
MGTALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQQQDVTAVPMSPSSHSPEGRPPPLLPGGPVCKAAASAPSSLLDQPCLCPAPSVRTAVALTTPDITLVLPPDVIQQEASALREETEAWARPHESLAREEALTALGKLLYLLDGMLDGQVNSGIAATPASAAAATLDVAVRRGLSHGAQRLLCVALGQLDRPPDLAHDGRSLWLNIRGKEAAALSMFHVSTPLPVMTGGFLSCILGLVLPLAYGFQPDLVLVALGPGHGLQGPHAALLAAMLRGLAGGRVLALLEENSTPQLAGILARVLNGEAPPSLGPSSVASPEDVQALMYLRGQLEPQWKMLQCHPHLVA

Atome Classification :

(54 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5OG_A_10(5EEN)
?
[Raw transfer]




5OK_D_5(5EFB)
?
[Raw transfer]




TSN_B_10(5EEF)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




TSN_A_5(5EEK)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




TSN_A_4(5EEF)
?
[Raw transfer]




LBH_B_11(5EF8)
?
[Raw transfer]




5OG_B_6(5EEN)
?
[Raw transfer]




LBH_A_6(5EF8)
?
[Raw transfer]




FMT_B_7(5EEM)
?
[Raw transfer]




5OJ_A_6(5EF7)
?
[Raw transfer]




5OJ_B_10(5EF7)
?
[Raw transfer]




FKS_D_6(5EFH)
?
[Raw transfer]




9F4_C_10(4CBT)

[Raw transfer]




SHH_B_17(3C0Z)
HDAC7_HUMAN
[Raw transfer]




9F4_B_7(4CBT)
HDAC4_HUMAN
[Raw transfer]




HA3_A_6(2VQV)
HDAC4_HUMAN
[Raw transfer]




TFG_A_8(2VQJ)

[Raw transfer]




TSN_C_18(3C10)

[Raw transfer]




SHH_C_18(3C0Z)

[Raw transfer]




TSN_B_17(3C10)
HDAC7_HUMAN
[Raw transfer]




OTF_B_7(5A2S)

[Raw transfer]




FKS_A_13(5EFH)
?
[Raw transfer]




OTF_A_3(5A2S)
HDAC4_HUMAN
[Raw transfer]




HA3_B_13(2VQV)

[Raw transfer]




TFG_B_12(2VQQ)

[Raw transfer]




TSN_A_16(3C10)
HDAC7_HUMAN
[Raw transfer]




SHH_A_16(3C0Z)
HDAC7_HUMAN
[Raw transfer]




HA3_A_4(2VQM)

[Raw transfer]




TFG_A_7(2VQQ)
HDAC4_HUMAN
[Raw transfer]




TFG_B_12(2VQO)

[Raw transfer]




TFG_A_7(2VQO)
HDAC4_HUMAN
[Raw transfer]




NU9_A_8(3ZNR)
HDAC7_HUMAN
[Raw transfer]




NU7_A_8(3ZNS)
HDAC7_HUMAN
[Raw transfer]




NU7_C_18(3ZNS)

[Raw transfer]




NU7_B_13(3ZNS)
HDAC7_HUMAN
[Raw transfer]




EDO_A_4(5JI5)
?
[Raw transfer]




EDO_A_4(5JI5)
?
[Raw transfer]




MCM_A_10(5EFK)
?
[Raw transfer]




MCM_F_10(5EFN)
?
[Raw transfer]




MCM_E_15(5EFN)
?
[Raw transfer]




89 HHSearch 85.6954%-122 - C3 -5G0G 5.7 ?
21 PsiBlast_CBE 78.6253% 0 - C- -5G0I - ? -
1 PsiBlast_PDB 78.6253% 0 - C- -5G0I - ? -
23 PsiBlast_CBE 76.2952% -80 - C3 -5EDU - HDAC6_HUMAN (first)
92 HHSearch 75.5052% -74 - C3 -5EDU - HDAC6_HUMAN (first)
110 Fugue 75.0239% -6 - C3 -5G0J - ?
5 PsiBlast_PDB 74.7852% -75 - C3 -5EDU - HDAC6_HUMAN (first) -
90 HHSearch 73.6345% -69 - C3 -5G0H 5.6 ?
87 HHSearch 73.1146% -69 - C3 -5EEI - ?
29 PsiBlast_CBE 72.6446% -64 - C3 -5EEM - ?
26 PsiBlast_CBE 72.2846% -63 - C3 -5EF8 5.7 ?
28 PsiBlast_CBE 72.0346% -61 - C3 -5EEN 4.6 ?
10 PsiBlast_PDB 71.9846% -62 - C3 -5EF7 4.8 ?
9 PsiBlast_PDB 71.9746% -61 - C3 -5EEN 5.0 ?
24 PsiBlast_CBE 71.9446% -60 - C3 -5EFH 4.0 ?
13 PsiBlast_PDB 71.8246% -63 - C3 -5EFG - ?
30 PsiBlast_CBE 71.7346% -60 - C3 -5EEI - ?
15 PsiBlast_PDB 71.6446% -61 - C3 -5EFJ - ?
17 PsiBlast_PDB 71.5845% -60 - C3 -5EFN 3.0 ?
4 PsiBlast_PDB 71.5853% -42 - C3 -5EEF 5.5 ?
31 PsiBlast_CBE 71.5645% -61 - C3 -5EFN 3.2 ?
27 PsiBlast_CBE 71.5346% -61 - C3 -5EF7 4.6 ?
8 PsiBlast_PDB 71.3846% -61 - C3 -5EEM 3.8 ?
11 PsiBlast_PDB 70.9246% -61 - C3 -5EF8 6.7 ?
16 PsiBlast_PDB 70.9045% -60 - C3 -5EFK 3.2 ?
7 PsiBlast_PDB 70.6246% -60 - C3 -5EEK 3.5 ?
12 PsiBlast_PDB 69.9546% -58 - C3 -5EFB 5.1 ?
14 PsiBlast_PDB 69.2446% -61 - C3 -5EFH 3.2 ?
22 PsiBlast_CBE 69.1253% -21 - C3 -5EEF 5.5 ?
2 PsiBlast_PDB 67.7853% -17 - C3 -5G0G 5.9 ?
97 HHSearch 64.2835%-114 - C3 -5JI5 2.1 ?
32 PsiBlast_CBE 64.1537% -79 - C3 -2VQV 3.5
54 PsiBlast_CBE 64.1438% -34 - C3 -3C10 4.6 HDAC7_HUMAN
40 PsiBlast_CBE 64.0837% -29 - C3 -5A2S 6.9
20 PsiBlast_PDB 63.8237% -79 - C3 -2VQV 3.5 HDAC4_HUMAN
57 PsiBlast_CBE 63.0238% -32 - C3 -3C0Z 3.0 HDAC7_HUMAN
39 PsiBlast_CBE 62.7037% -50 - C3 -4CBT 6.9 HDAC4_HUMAN
47 PsiBlast_CBE 62.2738% -31 - C3 -3ZNS 7.0 HDAC7_HUMAN
41 PsiBlast_CBE 61.7737% -28 - C3 -5A2S 6.6 HDAC4_HUMAN
38 PsiBlast_CBE 61.3837% -75 - C3 -4CBT 7.0
36 PsiBlast_CBE 59.9637% -37 - C3 -2VQM 3.4
53 PsiBlast_CBE 59.3738% -15 - C3 -3C10 4.8 HDAC7_HUMAN
51 PsiBlast_CBE 59.2538% -16 - C3 -3ZNR 6.7 HDAC7_HUMAN
56 PsiBlast_CBE 59.0438% -14 - C3 -3C0Z 3.0 HDAC7_HUMAN
48 PsiBlast_CBE 58.7138% -16 * C3 *3ZNS 7.3 HDAC7_HUMAN
34 PsiBlast_CBE 58.5737% -43 - C3 -2VQQ 4.8
33 PsiBlast_CBE 58.5537% -42 - C3 -2VQO 3.8
37 PsiBlast_CBE 58.4037% -31 - C3 -2VQJ 3.6
52 PsiBlast_CBE 57.8038% -14 - C3 -3C10 4.7
19 PsiBlast_PDB 57.5837% -27 - C3 -2VQO 4.5 HDAC4_HUMAN
46 PsiBlast_CBE 57.2338% -13 - C3 -3ZNS 6.8
55 PsiBlast_CBE 56.1838% -13 - C3 -3C0Z 2.9
35 PsiBlast_CBE 55.7937% -28 - C3 -2VQQ 3.8 HDAC4_HUMAN
81 PsiBlast_CBE 53.5034% -57 - C3 -5JI5 3.1 ?