@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : HDAC5_HUMAN: (2017-06-15 )
MNSPNESDGMSGREPSLEILPRTSLHSIPVTVEVKPVLPRAMPSSMGGGGGGSPSPVELRGALVGSVDPTLREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQQQEMLAAKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLPGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGAGPGASSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGCLLGVALEGDGSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQLGKILTKTGELPRQPTTHPEETEEELTEQQEVLLGEGALTMPREGSTESESTQEDLEEEDEEDDGEEEEDCIQVKDEEGESGAEEGPDLEEPGAGYKKLFSDAQPLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGGMKSPPDQPVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQKFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAAREHSPRPAEEPMEQEPAL

Atome Classification :

(92 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5YA_B_11(5FCW)
?
[Raw transfer]




9F4_C_10(4CBT)

[Raw transfer]




9F4_B_7(4CBT)
HDAC4_HUMAN
[Raw transfer]




OTF_A_3(5A2S)
HDAC4_HUMAN
[Raw transfer]




OTF_B_7(5A2S)

[Raw transfer]




N4R_A_10(5G0J)
?
[Raw transfer]




TSN_B_17(3C10)
HDAC7_HUMAN
[Raw transfer]




TSN_C_18(3C10)

[Raw transfer]




TSN_A_5(5EEK)
?
[Raw transfer]




TFG_B_12(2VQQ)

[Raw transfer]




TFG_B_12(2VQO)

[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




FMT_B_7(5EEM)
?
[Raw transfer]




6XA_B_12(4ZUQ)
APHA_MYCRA
[Raw transfer]




TSN_A_4(5EEF)
?
[Raw transfer]




5OG_B_6(5EEN)
?
[Raw transfer]




SHH_C_18(3C0Z)

[Raw transfer]




5XA_B_16(4ZUP)
APHA_MYCRA
[Raw transfer]




FKS_D_6(5EFH)
?
[Raw transfer]




6XA_A_5(4ZUQ)
APHA_MYCRA
[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




TSN_A_16(3C10)
HDAC7_HUMAN
[Raw transfer]




5OG_A_10(5EEN)
?
[Raw transfer]




5XA_A_7(4ZUP)
APHA_MYCRA
[Raw transfer]




XS6_A_6(4ZUO)
APHA_MYCRA
[Raw transfer]




5OK_D_5(5EFB)
?
[Raw transfer]




TFG_A_7(2VQQ)
HDAC4_HUMAN
[Raw transfer]




TFG_A_8(2VQJ)

[Raw transfer]




NU7_A_8(3ZNS)
HDAC7_HUMAN
[Raw transfer]




LBH_B_11(5EF8)
?
[Raw transfer]




NU9_A_8(3ZNR)
HDAC7_HUMAN
[Raw transfer]




5OJ_B_10(5EF7)
?
[Raw transfer]




FKS_A_6(4ZUM)
APHA_MYCRA
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




FKS_B_13(4ZUM)
APHA_MYCRA
[Raw transfer]




NU7_B_13(3ZNS)
HDAC7_HUMAN
[Raw transfer]




HA3_A_6(2VQV)
HDAC4_HUMAN
[Raw transfer]




5OJ_A_6(5EF7)
?
[Raw transfer]




TFG_A_7(2VQO)
HDAC4_HUMAN
[Raw transfer]




5YA_B_7(5FCW)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




XS6_B_12(4ZUO)
APHA_MYCRA
[Raw transfer]




NU7_C_18(3ZNS)

[Raw transfer]




FKS_A_13(5EFH)
?
[Raw transfer]




B3N_A_5(1T67)
HDAC8_HUMAN
[Raw transfer]




TSN_B_10(5D1B)
HDAC8_HUMAN
[Raw transfer]




TSN_B_12(3F0R)
HDAC8_HUMAN
[Raw transfer]




TSN_B_15(1T64)
HDAC8_HUMAN
[Raw transfer]




TSN_C_17(3F0R)
HDAC8_HUMAN
[Raw transfer]




V5X_B_10(2V5X)
HDAC8_HUMAN
[Raw transfer]




TSN_A_13(1T64)
HDAC8_HUMAN
[Raw transfer]




AGE_B_12(3F07)
HDAC8_HUMAN
[Raw transfer]




LBH_A_6(5EF8)
?
[Raw transfer]




SHH_A_16(3C0Z)
HDAC7_HUMAN
[Raw transfer]




TSN_B_10(5EEF)
?
[Raw transfer]




SHH_A_3(1T69)
HDAC8_HUMAN
[Raw transfer]




TSN_A_8(3F0R)
HDAC8_HUMAN
[Raw transfer]




HA3_B_13(2VQV)

[Raw transfer]




GOL_D_11(5DC6)
HDAC8_HUMAN
[Raw transfer]




AGE_A_8(3F07)
HDAC8_HUMAN
[Raw transfer]




GOL_C_12(5DC8)
HDAC8_HUMAN
[Raw transfer]




SHH_B_17(3C0Z)
HDAC7_HUMAN
[Raw transfer]




GOL_A_7(5DC6)
HDAC8_HUMAN
[Raw transfer]




HA3_A_4(2VQM)

[Raw transfer]




GOL_D_12(5DC7)
HDAC8_HUMAN
[Raw transfer]




NHB_B_10(1W22)
HDAC8_HUMAN
[Raw transfer]




GOL_A_7(5DC7)
HDAC8_HUMAN
[Raw transfer]




1DI_A_8(3SFH)
HDAC8_HUMAN
[Raw transfer]




0DI_A_2(3SFF)
HDAC8_HUMAN
[Raw transfer]




SS9_A_3(4ZUN)
APHA_MYCRA
[Raw transfer]




CHAIN_D_4(4QA5)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_C_3(4QA5)
HDAC8_HUMAN
[Raw transfer]

-

SS9_B_13(4ZUN)
APHA_MYCRA
[Raw transfer]




EDO_A_4(5JI5)
?
[Raw transfer]




TSN_B_10(5D1B)
HDAC8_HUMAN
[Raw transfer]




EDO_A_4(5JI5)
?
[Raw transfer]




V5X_B_10(2V5X)
HDAC8_HUMAN
[Raw transfer]




NHB_B_10(1W22)
HDAC8_HUMAN
[Raw transfer]




MCM_F_10(5EFN)
?
[Raw transfer]




MCM_A_10(5EFK)
?
[Raw transfer]




CHAIN_L_5(2V5W)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_D_4(4QA6)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_C_3(4QA6)
HDAC8_HUMAN
[Raw transfer]

-

MCM_E_15(5EFN)
?
[Raw transfer]




CHAIN_B_2(4QA7)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_L_5(2V5W)
HDAC8_HUMAN
[Raw transfer]

-

6 PsiBlast_PDB 80.6177%-120 - C4 -4CBY - HDAC4_HUMAN
27 PsiBlast_CBE 80.3877%-122 - C4 -4CBY -
29 PsiBlast_CBE 80.3577%-119 - C4 -4CBY - HDAC4_HUMAN
28 PsiBlast_CBE 80.3377%-121 - C4 -4CBY - HDAC4_HUMAN
1 PsiBlast_PDB 80.2476%-116 - C4 -2VQJ 3.8
26 PsiBlast_CBE 80.2177%-120 - C4 -5A2S 7.4
7 PsiBlast_PDB 80.1077%-118 - C4 -5A2S 7.3 HDAC4_HUMAN
2 PsiBlast_PDB 78.8376%-119 - C4 -2VQM 3.3
4 PsiBlast_PDB 77.1576%-115 - C4 -2VQO 4.4 HDAC4_HUMAN
3 PsiBlast_PDB 76.9776%-112 - C4 -2VQQ 4.4 HDAC4_HUMAN
23 PsiBlast_CBE 76.6176%-117 - C4 -2VQO 4.8
25 PsiBlast_CBE 76.5277%-115 - C4 -4CBT 7.6 HDAC4_HUMAN
22 PsiBlast_CBE 76.4876%-117 - C4 -2VQV 4.0
5 PsiBlast_PDB 76.4376%-117 - C4 -2VQV 4.2 HDAC4_HUMAN
21 PsiBlast_CBE 76.1176%-115 - C4 -2VQQ 4.5
31 PsiBlast_CBE 75.9966%-117 - C4 -3ZNS 7.7 HDAC7_HUMAN
24 PsiBlast_CBE 74.2077%-118 - C4 -4CBT 7.6
32 PsiBlast_CBE 73.8866%-116 - C4 -3ZNR -
38 PsiBlast_CBE 73.6166%-117 - C4 -3C0Y -
34 PsiBlast_CBE 73.5466%-118 - C4 -3C10 5.6
30 PsiBlast_CBE 73.4066%-119 - C4 -3ZNS 8.2
36 PsiBlast_CBE 73.3766%-114 - C4 -3C0Z 3.0
9 PsiBlast_PDB 71.8366% -49 - C4 -3C0Z 3.3 HDAC7_HUMAN
10 PsiBlast_PDB 71.7166% -45 - C4 -3C10 5.7 HDAC7_HUMAN
12 PsiBlast_PDB 70.4166% -47 - C4 -3ZNS 8.5 HDAC7_HUMAN
11 PsiBlast_PDB 70.3166% -48 - C4 -3ZNR 8.1 HDAC7_HUMAN
37 PsiBlast_CBE 70.2866% -49 - C4 -3C0Z 3.1 HDAC7_HUMAN
35 PsiBlast_CBE 70.1066% -48 - C4 -3C10 5.6 HDAC7_HUMAN
190 HHSearch 62.7045% -59 - C4 -5G0H 5.5 ?
48 PsiBlast_CBE 62.5642% -60 - C4 -5EF8 6.7 ?
20 PsiBlast_PDB 62.4742% -59 - C4 -5EF7 4.2 ?
49 PsiBlast_CBE 62.3842% -59 - C4 -5EF7 4.3 ?
17 PsiBlast_PDB 61.9842% -60 - C4 -5EEK 5.6 ?
46 PsiBlast_CBE 61.9742% -60 - C4 -5EFB 4.4 ?
47 PsiBlast_CBE 61.8642% -58 - C4 -5EF8 7.0 ?
55 PsiBlast_CBE 61.7342% -59 - C4 -5EFN 2.9 ?
18 PsiBlast_PDB 61.6842% -62 - C4 -5EEM 3.5 ?
43 PsiBlast_CBE 61.6242% -58 - C4 -5EFH 4.3 ?
50 PsiBlast_CBE 61.5942% -57 - C4 -5EEN 5.6 ?
19 PsiBlast_PDB 61.4342% -60 - C4 -5EEN 5.6 ?
14 PsiBlast_PDB 61.4242% -59 - C4 -5G0H 5.5 ?
54 PsiBlast_CBE 61.4042% -60 - C4 -5EFN 3.7 ?
53 PsiBlast_CBE 61.3442% -57 - C4 -5EFK 2.7 ?
15 PsiBlast_PDB 61.3342% -55 - C4 -5G0J 6.1 ?
42 PsiBlast_CBE 61.2042% -57 - C4 -5EFH 4.0 ?
191 HHSearch 60.3238% -69 - C4 -5G0G 5.5 ?
58 PsiBlast_CBE 60.0037% -43 * C4 *5G0G 5.8 ?
59 PsiBlast_CBE 59.1237% -43 - C4 -5EEF 5.4 ?
60 PsiBlast_CBE 58.8737% -44 - C4 -5EEF 6.0 ?
199 HHSearch 53.8434%-115 - C4 -5JI5 2.9 ?
81 PsiBlast_CBE 47.1632% -48 - C4 -5JI5 2.9 ?
88 PsiBlast_CBE 44.4931%-132 - C4 -3F0R 4.1 HDAC8_HUMAN
100 PsiBlast_CBE 44.4331%-131 - C4 -1T69 2.9 HDAC8_HUMAN
84 PsiBlast_CBE 44.2231%-130 - C4 -5D1B 4.4 HDAC8_HUMAN
90 PsiBlast_CBE 44.2131%-129 - C4 -3F0R 4.1 HDAC8_HUMAN
105 PsiBlast_CBE 44.1231%-132 - C4 -3SFF 7.2 HDAC8_HUMAN
104 PsiBlast_CBE 44.0931%-127 - C4 -3SFH 6.9 HDAC8_HUMAN
87 PsiBlast_CBE 43.8531%-133 - C4 -5FCW Error ?
86 PsiBlast_CBE 43.7331%-132 - C4 -5FCW 4.1 ?
96 PsiBlast_CBE 43.6731%-130 - C4 -1W22 4.1 HDAC8_HUMAN
85 PsiBlast_CBE 43.6631%-126 - C4 -5D1B 4.0 HDAC8_HUMAN
103 PsiBlast_CBE 43.5731%-129 - C4 -1T64 4.5 HDAC8_HUMAN
102 PsiBlast_CBE 43.5431%-130 - C4 -1T64 4.6 HDAC8_HUMAN
101 PsiBlast_CBE 43.4731%-131 - C4 -1T67 4.1 HDAC8_HUMAN
97 PsiBlast_CBE 43.2931%-130 - C4 -1W22 4.0 HDAC8_HUMAN
89 PsiBlast_CBE 43.2731%-128 - C4 -3F0R 3.9 HDAC8_HUMAN
93 PsiBlast_CBE 43.2531%-131 - C4 -3F07 4.4 HDAC8_HUMAN
95 PsiBlast_CBE 43.1631%-130 - C4 -2V5X 3.9 HDAC8_HUMAN
94 PsiBlast_CBE 42.8231%-129 - C4 -2V5X 4.5 HDAC8_HUMAN
92 PsiBlast_CBE 42.8031%-131 - C4 -3F07 4.9 HDAC8_HUMAN
123 PsiBlast_CBE 42.0231%-137 - C4 -5DC7 2.3 HDAC8_HUMAN
118 PsiBlast_CBE 41.8132%-132 - C4 -5DC8 2.6 HDAC8_HUMAN
121 PsiBlast_CBE 41.6231%-136 - C4 -5DC6 2.5 HDAC8_HUMAN
122 PsiBlast_CBE 41.5331%-137 - C4 -5DC6 2.6 HDAC8_HUMAN
111 PsiBlast_CBE 41.3232%-132 - C4 -2V5W 4.8 HDAC8_HUMAN
119 PsiBlast_CBE 41.3131%-132 - C4 -4QA5 3.8 HDAC8_HUMAN
106 PsiBlast_CBE 41.1332%-135 - C4 -4QA7 3.6 HDAC8_HUMAN
112 PsiBlast_CBE 41.1132%-134 - C4 -2V5W 3.4 HDAC8_HUMAN
115 PsiBlast_CBE 40.9032%-130 - C4 -4QA6 3.6 HDAC8_HUMAN
124 PsiBlast_CBE 40.8131%-135 - C4 -5DC7 1.8 HDAC8_HUMAN
120 PsiBlast_CBE 40.6831%-129 - C4 -4QA5 3.2 HDAC8_HUMAN
116 PsiBlast_CBE 40.6832%-130 - C4 -4QA6 3.8 HDAC8_HUMAN
127 PsiBlast_CBE 39.8931% -76 - C4 -4ZUQ 2.6 APHA_MYCRA
134 PsiBlast_CBE 39.7231% -74 - C4 -4ZUN 2.7 APHA_MYCRA
129 PsiBlast_CBE 39.3231% -74 - C4 -4ZUP 2.6 APHA_MYCRA
132 PsiBlast_CBE 39.1731% -75 - C4 -4ZUO 3.4 APHA_MYCRA
136 PsiBlast_CBE 38.7431% -75 - C4 -4ZUM 3.8 APHA_MYCRA
133 PsiBlast_CBE 38.7131% -74 - C4 -4ZUN 2.6 APHA_MYCRA
128 PsiBlast_CBE 38.6231% -76 - C4 -4ZUQ 2.8 APHA_MYCRA
131 PsiBlast_CBE 38.5531% -73 - C4 -4ZUO 3.4 APHA_MYCRA
130 PsiBlast_CBE 38.5131% -73 - C4 -4ZUP 2.6 APHA_MYCRA
135 PsiBlast_CBE 38.0531% -74 - C4 -4ZUM 4.0 APHA_MYCRA