@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : HDAC7_HUMAN: (2017-06-15 )
MDLRVGQRPPVEPPPEPTLLALQRPQRLHHHLFLAGLQQQRSVEPMRLSMDTPMPELQVGPQEQELRQLLHKDKSKRSAVASSVVKQKLAEVILKKQQAALERTVHPNSPGIPYRTLEPLETEGATRSMLSSFLPPVPSLPSDPPEHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRKESAPPSLRRRPAETLGDSSPSSSSTPASGCSSPNDSEHGPNPILGSEALLGQRLRLQETSVAPFALPTVSLLPAITLGLPAPARADSDRRTHPTLGPRGPILGSPHTPLFLPHGLEPEAGGTLPSRLQPILLLDPSGSHAPLLTVPGLGPLPFHFAQSLMTTERLSGSGLHWPLSRTRSEPLPPSATAPPPPGPMQPRLEQLKTHVQVIKRSAKPSEKPRLRQIPSAEDLETDGGGPGQVVDDGLEHRELGHGQPEARGPAPLQQHPQVLLWEQQRLAGRLPRGSTGDTVLLPLAQGGHRPLSRAQSSPAAPASLSAPEPASQARVLSSSETPARTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL

Atome Classification :

(135 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5YA_B_11(5FCW)
?
[Raw transfer]




TSN_B_17(3C10)
HDAC7_HUMAN
[Raw transfer]




9F4_C_10(4CBT)

[Raw transfer]




9F4_B_7(4CBT)
HDAC4_HUMAN
[Raw transfer]




N4R_A_10(5G0J)
?
[Raw transfer]




TSN_A_16(3C10)
HDAC7_HUMAN
[Raw transfer]




OTF_A_3(5A2S)
HDAC4_HUMAN
[Raw transfer]




SHH_C_18(3C0Z)

[Raw transfer]




TSN_C_18(3C10)

[Raw transfer]




NU9_A_8(3ZNR)
HDAC7_HUMAN
[Raw transfer]




OTF_B_7(5A2S)

[Raw transfer]




TFG_B_12(2VQQ)

[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




TSN_A_5(5EEK)
?
[Raw transfer]




NU7_A_8(3ZNS)
HDAC7_HUMAN
[Raw transfer]




NU7_B_13(3ZNS)
HDAC7_HUMAN
[Raw transfer]




FMT_B_7(5EEM)
?
[Raw transfer]




5OG_B_6(5EEN)
?
[Raw transfer]




TFG_B_12(2VQO)

[Raw transfer]




5OG_A_10(5EEN)
?
[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




N4R_A_10(5G0J)
?
[Raw transfer]




FKS_D_6(5EFH)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




TFG_A_8(2VQJ)

[Raw transfer]




TFG_A_7(2VQQ)
HDAC4_HUMAN
[Raw transfer]




LBH_B_11(5EF8)
?
[Raw transfer]




NU7_C_18(3ZNS)

[Raw transfer]




5OK_D_5(5EFB)
?
[Raw transfer]




TFG_A_7(2VQO)
HDAC4_HUMAN
[Raw transfer]




5OJ_B_10(5EF7)
?
[Raw transfer]




SHH_B_17(3C0Z)
HDAC7_HUMAN
[Raw transfer]




5OJ_A_6(5EF7)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




SHH_A_16(3C0Z)
HDAC7_HUMAN
[Raw transfer]




TSN_A_4(5EEF)
?
[Raw transfer]




HA3_A_6(2VQV)
HDAC4_HUMAN
[Raw transfer]




TSN_B_10(5EEF)
?
[Raw transfer]




FKS_A_13(5EFH)
?
[Raw transfer]




LBH_A_6(5EF8)
?
[Raw transfer]




GOL_C_12(5DC8)
HDAC8_HUMAN
[Raw transfer]




B3N_A_5(1T67)
HDAC8_HUMAN
[Raw transfer]




HA3_B_13(2VQV)

[Raw transfer]




GOL_D_11(5DC6)
HDAC8_HUMAN
[Raw transfer]




GOL_A_7(5DC6)
HDAC8_HUMAN
[Raw transfer]




B3N_A_5(3MZ7)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(3F06)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(3MZ4)
HDAC8_HUMAN
[Raw transfer]




HA3_A_4(2VQM)

[Raw transfer]




B3N_A_2(4QA4)
HDAC8_HUMAN
[Raw transfer]




V5X_B_10(2V5X)
HDAC8_HUMAN
[Raw transfer]




5YA_B_7(5FCW)
?
[Raw transfer]




B3N_B_10(3MZ3)
HDAC8_HUMAN
[Raw transfer]




B3N_A_5(3MZ6)
HDAC8_HUMAN
[Raw transfer]




B3N_B_11(3F06)
HDAC8_HUMAN
[Raw transfer]




GOL_D_12(5DC7)
HDAC8_HUMAN
[Raw transfer]




B3N_B_11(3EZP)
HDAC8_HUMAN
[Raw transfer]




NHB_B_10(1W22)
HDAC8_HUMAN
[Raw transfer]




B3N_B_8(5DC5)
HDAC8_HUMAN
[Raw transfer]




5XA_A_7(4ZUP)
APHA_MYCRA
[Raw transfer]




XCH_B_10(5BWZ)
HDAC8_HUMAN
[Raw transfer]




B3N_A_5(3EW8)
HDAC8_HUMAN
[Raw transfer]




TSN_B_10(5D1B)
HDAC8_HUMAN
[Raw transfer]




B3N_B_11(3EZT)
HDAC8_HUMAN
[Raw transfer]




TSN_A_8(3F0R)
HDAC8_HUMAN
[Raw transfer]




SHH_B_10(4QA0)
HDAC8_HUMAN
[Raw transfer]




SHH_B_10(4QA2)
HDAC8_HUMAN
[Raw transfer]




6XA_B_12(4ZUQ)
APHA_MYCRA
[Raw transfer]




6XA_A_5(4ZUQ)
APHA_MYCRA
[Raw transfer]




TSN_B_12(4QA3)
HDAC8_HUMAN
[Raw transfer]




SHH_A_3(1T69)
HDAC8_HUMAN
[Raw transfer]




TSN_B_6(1C3R)
?
[Raw transfer]




XCH_A_6(5BWZ)
HDAC8_HUMAN
[Raw transfer]




TSN_A_5(1C3R)
?
[Raw transfer]




SHH_A_3(1C3S)
?
[Raw transfer]




5XA_B_16(4ZUP)
APHA_MYCRA
[Raw transfer]




GOL_A_7(5DC7)
HDAC8_HUMAN
[Raw transfer]




AGE_B_12(3F07)
HDAC8_HUMAN
[Raw transfer]




1DI_A_8(3SFH)
HDAC8_HUMAN
[Raw transfer]




AGE_A_8(3F07)
HDAC8_HUMAN
[Raw transfer]




FKS_B_13(4ZUM)
APHA_MYCRA
[Raw transfer]




FKS_A_6(4ZUM)
APHA_MYCRA
[Raw transfer]




XS6_A_6(4ZUO)
APHA_MYCRA
[Raw transfer]




0DI_A_2(3SFF)
HDAC8_HUMAN
[Raw transfer]




XS6_B_12(4ZUO)
APHA_MYCRA
[Raw transfer]




CHAIN_D_4(4QA5)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_C_3(4QA5)
HDAC8_HUMAN
[Raw transfer]

-

EDO_A_4(5JI5)
?
[Raw transfer]




CHAIN_D_4(3RQD)
HDAC8_HUMAN
[Raw transfer]

-

TSN_B_13(3F0R)
HDAC8_HUMAN
[Raw transfer]




SS9_A_3(4ZUN)
APHA_MYCRA
[Raw transfer]




B3N_A_6(3MZ4)
HDAC8_HUMAN
[Raw transfer]




EDO_A_4(5JI5)
?
[Raw transfer]




TSN_C_18(3F0R)
HDAC8_HUMAN
[Raw transfer]




SS9_B_13(4ZUN)
APHA_MYCRA
[Raw transfer]




TSN_A_14(1T64)
HDAC8_HUMAN
[Raw transfer]




TSN_B_10(5D1B)
HDAC8_HUMAN
[Raw transfer]




B3N_B_8(5DC5)
HDAC8_HUMAN
[Raw transfer]




TSN_B_12(4QA3)
HDAC8_HUMAN
[Raw transfer]




NHB_B_10(1W22)
HDAC8_HUMAN
[Raw transfer]




B3N_B_10(3MZ3)
HDAC8_HUMAN
[Raw transfer]




TSN_B_16(1T64)
HDAC8_HUMAN
[Raw transfer]




L8G_B_12(4RN1)
HDAC8_HUMAN
[Raw transfer]




B3N_B_11(3EZP)
HDAC8_HUMAN
[Raw transfer]




L6G_B_9(4RN0)
HDAC8_HUMAN
[Raw transfer]




L7G_B_10(4RN2)
HDAC8_HUMAN
[Raw transfer]




L7G_A_6(4RN2)
HDAC8_HUMAN
[Raw transfer]




V5X_B_10(2V5X)
HDAC8_HUMAN
[Raw transfer]




B3N_B_11(3EZT)
HDAC8_HUMAN
[Raw transfer]




CHAIN_L_5(2V5W)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_C_3(4QA6)
HDAC8_HUMAN
[Raw transfer]

-

MCM_E_15(5EFN)
?
[Raw transfer]




MCM_A_10(5EFK)
?
[Raw transfer]




MCM_F_10(5EFN)
?
[Raw transfer]




CHAIN_B_2(4QA7)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_D_4(4QA6)
HDAC8_HUMAN
[Raw transfer]

-

L8G_B_12(4RN1)
HDAC8_HUMAN
[Raw transfer]




CHAIN_L_8(3EWF)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_L_5(2V5W)
HDAC8_HUMAN
[Raw transfer]

-

SHH_B_10(4QA0)
HDAC8_HUMAN
[Raw transfer]




L6G_B_9(4RN0)
HDAC8_HUMAN
[Raw transfer]




CHAIN_I_5(3EWF)
HDAC8_HUMAN
[Raw transfer]

-

SHH_B_10(4QA2)
HDAC8_HUMAN
[Raw transfer]




CHAIN_K_7(3EWF)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_J_6(3EWF)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_D_4(3RQD)
HDAC8_HUMAN
[Raw transfer]

-

1 PsiBlast_PDB 85.47100%-113 - C5 -3C0Y - HDAC7_HUMAN
3 PsiBlast_PDB 85.36100%-112 - C5 -3C10 5.6 HDAC7_HUMAN
2 PsiBlast_PDB 85.28100%-112 - C5 -3C0Z 3.2 HDAC7_HUMAN
22 PsiBlast_CBE 84.94100%-113 - C5 -3ZNS 7.7 HDAC7_HUMAN
24 PsiBlast_CBE 84.93100%-110 - C5 -3ZNR - HDAC7_HUMAN
4 PsiBlast_PDB 84.55100%-111 - C5 -3ZNR 8.1 HDAC7_HUMAN
28 PsiBlast_CBE 84.24100%-112 - C5 -3C0Z 3.1 HDAC7_HUMAN
30 PsiBlast_CBE 84.11100%-113 - C5 -3C0Y - HDAC7_HUMAN
5 PsiBlast_PDB 84.03100%-115 - C5 -3ZNS 8.5 HDAC7_HUMAN
26 PsiBlast_CBE 83.54100%-112 - C5 -3C10 5.6 HDAC7_HUMAN
21 PsiBlast_CBE 83.27100%-115 - C5 -3ZNS 8.2
23 PsiBlast_CBE 82.98100%-112 - C5 -3ZNR -
25 PsiBlast_CBE 82.75100%-114 - C5 -3C10 5.6
29 PsiBlast_CBE 82.21100%-113 - C5 -3C0Y -
27 PsiBlast_CBE 81.93100%-110 - C5 -3C0Z 3.0
11 PsiBlast_PDB 79.8975%-113 - C5 -4CBY - HDAC4_HUMAN
39 PsiBlast_CBE 79.6275%-112 - C5 -4CBY - HDAC4_HUMAN
37 PsiBlast_CBE 79.4475%-115 - C5 -4CBY -
12 PsiBlast_PDB 79.3875%-111 - C5 -5A2S 7.3 HDAC4_HUMAN
38 PsiBlast_CBE 79.1275%-114 - C5 -4CBY - HDAC4_HUMAN
36 PsiBlast_CBE 79.0975%-112 - C5 -5A2S 7.4
6 PsiBlast_PDB 78.9172%-110 - C5 -2VQJ 3.8
7 PsiBlast_PDB 78.1272%-113 - C5 -2VQM 3.3
8 PsiBlast_PDB 75.5371%-106 - C5 -2VQQ 4.5 HDAC4_HUMAN
9 PsiBlast_PDB 75.5071%-109 - C5 -2VQO 4.4 HDAC4_HUMAN
35 PsiBlast_CBE 75.4271%-110 - C5 -2VQO 4.8
33 PsiBlast_CBE 75.3175%-110 - C5 -4CBT 7.5 HDAC4_HUMAN
31 PsiBlast_CBE 75.0371%-109 - C5 -2VQQ 4.5
34 PsiBlast_CBE 74.8871%-113 - C5 -2VQV 4.0
10 PsiBlast_PDB 74.7571%-113 - C5 -2VQV 4.2 HDAC4_HUMAN
32 PsiBlast_CBE 73.8175%-114 - C5 -4CBT 7.6
20 PsiBlast_PDB 63.8943% -56 - C5 -5EF7 4.2 ?
48 PsiBlast_CBE 63.7443% -55 - C5 -5EF8 6.7 ?
231 HHSearch 63.0745% -54 - C5 -5G0H 5.5 ?
55 PsiBlast_CBE 63.0742% -55 - C5 -5EFN 2.9 ?
18 PsiBlast_PDB 63.0343% -55 - C5 -5EEM 3.5 ?
47 PsiBlast_CBE 63.0143% -53 - C5 -5EF8 6.8 ?
49 PsiBlast_CBE 62.7843% -55 - C5 -5EF7 4.3 ?
46 PsiBlast_CBE 62.7743% -55 - C5 -5EFB 4.4 ?
14 PsiBlast_PDB 62.7743% -55 - C5 -5G0H 5.5 ?
50 PsiBlast_CBE 62.6343% -52 - C5 -5EEN 5.6 ?
53 PsiBlast_CBE 62.5243% -53 - C5 -5EFK 2.7 ?
15 PsiBlast_PDB 62.4943% -49 - C5 -5G0J 6.0 ?
17 PsiBlast_PDB 62.4343% -57 - C5 -5EEK 5.6 ?
43 PsiBlast_CBE 62.4243% -55 - C5 -5EFH 4.2 ?
19 PsiBlast_PDB 62.4043% -55 - C5 -5EEN 5.6 ?
54 PsiBlast_CBE 62.2042% -56 - C5 -5EFN 3.7 ?
232 HHSearch 62.1237% -62 - C5 -5G0G 5.5 ?
60 PsiBlast_CBE 61.7135% -44 - C5 -5EEF 5.6 ?
42 PsiBlast_CBE 61.5343% -53 - C5 -5EFH 4.0 ?
58 PsiBlast_CBE 61.0935% -44 - C5 -5G0G 5.7 ?
59 PsiBlast_CBE 61.0035% -43 - C5 -5EEF 5.4 ?
251 Fugue 58.3331% 6 - C5 -5G0J 6.0 ?
240 HHSearch 56.9235%-110 - C5 -5JI5 2.9 ?
81 PsiBlast_CBE 49.2933% -40 - C5 -5JI5 2.9 ?
95 PsiBlast_CBE 45.9131% -94 - C5 -4QA3 4.1 HDAC8_HUMAN
159 PsiBlast_CBE 45.2534%-109 - C5 -5DC7 2.2 HDAC8_HUMAN
88 PsiBlast_CBE 45.2035%-108 - C5 -4QA5 3.8 HDAC8_HUMAN
160 PsiBlast_CBE 44.9434%-110 - C5 -5DC7 1.6 HDAC8_HUMAN
145 PsiBlast_CBE 44.8934%-105 - C5 -2V5W 4.9 HDAC8_HUMAN
94 PsiBlast_CBE 44.8931% -91 - C5 -4QA3 3.7 HDAC8_HUMAN
126 PsiBlast_CBE 44.7734% -92 - C5 -3SFH 6.2 HDAC8_HUMAN
146 PsiBlast_CBE 44.5234%-107 - C5 -2V5W 3.2 HDAC8_HUMAN
151 PsiBlast_CBE 44.4634%-110 - C5 -5DC6 2.4 HDAC8_HUMAN
129 PsiBlast_CBE 44.4534% -91 - C5 -4RN2 3.2 HDAC8_HUMAN
152 PsiBlast_CBE 44.4034%-113 - C5 -5DC6 2.4 HDAC8_HUMAN
89 PsiBlast_CBE 44.2635%-102 - C5 -4QA5 3.2 HDAC8_HUMAN
96 PsiBlast_CBE 44.1134% -95 - C5 -3EW8 2.9 HDAC8_HUMAN
134 PsiBlast_CBE 44.1034%-107 - C5 -4QA7 3.5 HDAC8_HUMAN
154 PsiBlast_CBE 44.0334%-110 - C5 -5DC8 2.4 HDAC8_HUMAN
130 PsiBlast_CBE 43.9634% -92 - C5 -4RN1 3.2 HDAC8_HUMAN
111 PsiBlast_CBE 43.7734% -91 - C5 -3F0R 3.2 HDAC8_HUMAN
147 PsiBlast_CBE 43.6534%-104 - C5 -4QA6 3.7 HDAC8_HUMAN
117 PsiBlast_CBE 43.6034% -94 - C5 -2V5X 3.1 HDAC8_HUMAN
97 PsiBlast_CBE 43.6034% -94 - C5 -3EZT 3.3 HDAC8_HUMAN
102 PsiBlast_CBE 43.5934% -93 - C5 -5D1B 3.8 HDAC8_HUMAN
120 PsiBlast_CBE 43.5734% -93 - C5 -3RQD 3.6 HDAC8_HUMAN
121 PsiBlast_CBE 43.4834% -95 - C5 -3RQD 3.3 HDAC8_HUMAN
127 PsiBlast_CBE 43.4334% -96 - C5 -3SFF 6.1 HDAC8_HUMAN
142 PsiBlast_CBE 43.3834% -91 - C5 -1T67 4.1 HDAC8_HUMAN
141 PsiBlast_CBE 43.3734% -93 - C5 -1T69 2.8 HDAC8_HUMAN
148 PsiBlast_CBE 43.3234%-103 - C5 -4QA6 3.2 HDAC8_HUMAN
100 PsiBlast_CBE 43.3034% -95 - C5 -3F06 3.5 HDAC8_HUMAN
112 PsiBlast_CBE 43.2934% -91 - C5 -3F0R 4.0 HDAC8_HUMAN
110 PsiBlast_CBE 43.2634% -92 - C5 -3F0R 2.9 HDAC8_HUMAN
108 PsiBlast_CBE 43.2534% -92 - C5 -3MZ4 2.5 HDAC8_HUMAN