@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : S7UUG9_TOXGG: (2017-06-15 )
MVDASEGSSKEEEAGHVPHVEVESGRNCGEAWTKTRSSPFTSVWHISGETGAAAGHCREGSLHKLIATNNISGVRLWLSNPFCRGMINDLNHAGETPLHVAVQCCSPRILSLLLDPPPLQISPSLLASCSLRLPRPLAGTAEPPSGAPASSNEGAPLGGSAEEVADAGVASLKTQQPFSAETAISSVVATDAAAACDQLAMAAAARVDFSLSVDGIPTLHLLIGRTAFGGARGEDAMECLKRILLHIGRFQPGAADRCPRCSPGKTKPTACGRERSGVKAESVAFECGDHVSDPQAGGLRESQISHPGLGGQQEYGCQCCGGTLGSLDSRRKKEMREARDRVCCPEVFTVERQTSAADSVMLDLEEMDLQGRTALHLACSFGVSPVAELLLHAGASPWARRLGLGQLPIHSAIDADDPACCLLLLRHTLPCRFFVNFSCICGRRCDSGATGGRQAPVNTLALKRSPAATKFVFQLVRRCVRRGAWRCFRALLLYPTESSACFSGSVEGGDKAEGLQPGGSNSAASRRCEVENLGRKEDACERQGGRVRCVTKDVAASWCSGLHGLLDGEVRAWLYLREEARRAGALLDLKEQLQRVVTTSPACCQAAAASWTAVPASPCDGHKFGVKSESETGLLLSLFGTRGDAEGKTAKRGEGRTMVVTHALCLEHLPLPEPADMPLKRHKLMQRFPENPSRLEVVTSDRCGILRTREFSPLLWMDDPMPASLSDILRVHSMSYIARLKLRVEDAFGISTRLPSLSPPLSYAPGQTAAAATATGAEALAAAAAALDSKLQKEQYEKQKRQQIENVGSAGRYSFVFADGDTPVTCFSWAAAVHAAGAVIAAVDAVCERKCRNAFCAVRPPGHHLGNWGAAQTASNQLTDEDIAAGSQGFCLLNNVAIGAAYAKYNYARKGIRRIAIVDFDVHHGNGTEQIIRNVGMKIRKVKQPQGAALRLYRRAADELRGTSTLVSSNLSRDAPAAGDNSAHCGPDPCEVDATGSEKTPSQGYHVGDGGKVSAALPPQLAGPVDVPQWMGWRDERDAEELFFASIHAFDGTFYPGTGADCEDFSGPVVINVNILPHPTGPSLHKCCRCQKCSGRPCAGGAHRRCPRGRDAGVSYANASPMEVEMAARTPDVPVQVSWSCHFCRHPTLAPSSVAARRLFLKRIIRPLLRFGPDLLFISAGFDGHAQDQIGGAFGGFAEEDFRFFTHALVRCAERTCEGRVVSVLEGGYSVSGGVSSTLAASVKEHLRGLMRTPAGGSCFAGALGSEEPSNEAHEVAPRESSLSFPGKNGWEEDIEVGDAATSDVTASDVEESWQLIEGENTGMDGADSSDALLDEGSRRNGSDDGPSADALSHRRPREAKTLDGCASPGPHASTETASEASGHCEREHSADFPPGADACRSRGTEHRSPTNAFASSASAPSAQRYGDSATVNNNDLLTLRALCRGTDGCLR

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

N4R_A_10(5G0I)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




LBH_B_11(5EF8)
?
[Raw transfer]




TSN_A_5(5EEK)
?
[Raw transfer]




SHH_A_6(5EEI)
?
[Raw transfer]




3YP_A_5(1ZZ3)
HDAH_ALCSD
[Raw transfer]




TSN_B_10(5EEF)
?
[Raw transfer]




TSN_A_4(5EEF)
?
[Raw transfer]




B3N_A_8(4BZ7)
?
[Raw transfer]




OTF_B_7(5A2S)

[Raw transfer]




N4R_B_20(5G0I)
?
[Raw transfer]




5OJ_B_10(5EF7)
?
[Raw transfer]




SHH_B_14(5EEI)
?
[Raw transfer]




FKS_A_13(5EFH)
?
[Raw transfer]




5OG_B_6(5EEN)
?
[Raw transfer]




5OG_A_10(5EEN)
?
[Raw transfer]




7XA_A_6(4ZUR)
APHA_MYCRA
[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




TSN_B_3(5EDU)
HDAC6_HUMAN
[Raw transfer]




SHH_A_17(1ZZ1)
HDAH_ALCSD
[Raw transfer]




148 HHSearch 72.4940% -24 - C3 -5JI5 5.1 ?
145 HHSearch 71.5227% -33 * C3 *5G0G 5.5 ?
152 HHSearch 70.6728% -39 - C3 -5EDU 5.4 HDAC6_HUMAN (first)
156 HHSearch 68.1824% -42 - C3 -4ZUR 4.8 APHA_MYCRA
147 HHSearch 67.9826% -38 - C3 -1ZZ1 4.8 HDAH_ALCSD
149 HHSearch 67.8525% -26 - C3 -5G0H 5.6 ?
143 HHSearch 65.9925% -24 - C3 -5EEI 6.3 ?
154 HHSearch 56.0117% -3 - C3 -4LY1 6.0 HDAC2_HUMAN
153 HHSearch 55.7921% -25 - C3 -4A69 5.2 HDAC3_HUMAN
158 HHSearch 55.4217% 3 - C3 -4BKX 4.5 HDAC1_HUMAN
155 HHSearch 55.0219% -23 - C3 -5DC8 5.2 HDAC8_HUMAN
159 HHSearch 52.0617% -36 - C3 -4BZ7 4.1 ?


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

N4R_A_10(5G0I)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




LBH_B_11(5EF8)
?
[Raw transfer]




TSN_A_5(5EEK)
?
[Raw transfer]




SHH_A_6(5EEI)
?
[Raw transfer]




3YP_A_5(1ZZ3)
HDAH_ALCSD
[Raw transfer]




TSN_B_10(5EEF)
?
[Raw transfer]




TSN_A_4(5EEF)
?
[Raw transfer]




B3N_A_8(4BZ7)
?
[Raw transfer]




OTF_B_7(5A2S)

[Raw transfer]




N4R_B_20(5G0I)
?
[Raw transfer]




5OJ_B_10(5EF7)
?
[Raw transfer]




SHH_B_14(5EEI)
?
[Raw transfer]




FKS_A_13(5EFH)
?
[Raw transfer]




5OG_B_6(5EEN)
?
[Raw transfer]




5OG_A_10(5EEN)
?
[Raw transfer]




7XA_A_6(4ZUR)
APHA_MYCRA
[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




TSN_B_3(5EDU)
HDAC6_HUMAN
[Raw transfer]




SHH_A_17(1ZZ1)
HDAH_ALCSD
[Raw transfer]




177 100.00100% 0 - C- -M177 - -
176 100.00100% 0 - C- -M176 - -