@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : S7UZC5_TOXGG: (2017-06-15 )
MGHPPPWTASPLFFLLLFWHAPPSLVSSSLHAGHALHVHPAHNPSLPPLSLPSDRPGAAGDGQTGASLVHNARAALPLCASRVFAGGALQPSTAVPPRTQPLHRCARRYAPSGRLLLKPRLGLKALPIHEVAEGRAEQEDRARPPDPSVSGRTLTCVTLRTKETCNDADCGGLACRTGNATIAGRGARASDGRQPPTKQEGVFPVATSFRFSSRSLRSSTPLSRYLLSSSPSENKFEFHHFLSYTVTAELPTSAFTFVDAPQSLTSCADVWSHPCRAFVFFPLQRSRTSVGFSPSSHSIRPSPRRWFSSVNLCALRASFGSIASSCSSPVGPDHSSLTAVAITRSVRCFPSHSAPFPPSSSCDLLSASSPSHASLPACSASASSSSPPSRARPTVCLYVPRTHSPRPPRSVGSAASPSSGGPRVSQSEGTPSGPVDSPLSPTSRGSCSYSTPSVSCPGGLLLSLPSVSPVSLSASLRHFLVSYTSPFPARSLPLIFVDAGLSLASDASLHAARPVGLSQEHRETCASALGSLIDTAVASNALAQTSCECRPRGLPIVYSPRLVPPSFPRNHCLQPQKLGRLFSFLTHPSGASNLRTPESGVTKTWEAREAEIAKATSGVEGSHEFRWDYVTVHSDLRPKRLNSDHPVTKAGIGVGENRGREKNGEDGRPSEAGCEKSTSPSHALSPSASVPHGPVDATRQNGCGRDDPPRCTHPAGVQVTAGNELNRNPLLAGSHDQHMDSTRATLGTSVSSCFSLFSPIHDADVTRAWLRVVHAPEYVCAASAAVLSEEEERKIGFPVTKGYADKSLAEVSSTVLGTWLAFHFGLACVVGGGTHHAKTDSGGKFCVFNDVAVAAALALKQGIAERILILDLDVHQGDGTAEIFSNEPRVKTVSIHCEDNFPFPKAQSDVDIGLPAGTGDEVYLRQLNEVG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NH4_A_5(5EEF)
?
[Raw transfer]




NH4_B_11(5EEF)
?
[Raw transfer]




3YP_C_7(1ZZ3)
HDAH_ALCSD
[Raw transfer]




SHH_A_17(1ZZ1)
HDAH_ALCSD
[Raw transfer]




3YP_A_5(1ZZ3)
HDAH_ALCSD
[Raw transfer]




TSN_A_4(5EEF)
?
[Raw transfer]




3YP_D_8(1ZZ3)
HDAH_ALCSD
[Raw transfer]




S17_A_8(2VCG)
HDAH_ALCSD
[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




N4R_B_20(5G0I)
?
[Raw transfer]




SHH_A_6(5EEI)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




N4R_A_10(5G0I)
?
[Raw transfer]




20Y_A_10(4LY1)
HDAC2_HUMAN
[Raw transfer]




TSN_B_10(5EEF)
?
[Raw transfer]




TSN_B_3(5EDU)
HDAC6_HUMAN
[Raw transfer]




NH4_B_12(5EEF)
?
[Raw transfer]




NH4_A_6(5EEF)
?
[Raw transfer]




S17_D_23(2VCG)
HDAH_ALCSD
[Raw transfer]




NH4_A_5(4ZUR)
APHA_MYCRA
[Raw transfer]




7XA_A_6(4ZUR)
APHA_MYCRA
[Raw transfer]




B3N_A_8(4BZ7)
?
[Raw transfer]




S17_C_17(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_A_5(3MEN)
APHA_BURP1
[Raw transfer]




ZN_B_3(4BKX)
HDAC1_HUMAN
[Raw transfer]




ZN_A_5(5DC8)
HDAC8_HUMAN
[Raw transfer]




ZN_A_5(4A69)
HDAC3_HUMAN
[Raw transfer]




ZN_B_9(5EEF)
?
[Raw transfer]




ZN_A_3(4ZUR)
APHA_MYCRA
[Raw transfer]




ZN_A_4(4LY1)
HDAC2_HUMAN
[Raw transfer]




ZN_B_4(5EDU)
HDAC6_HUMAN
[Raw transfer]




ZN_A_5(1ZZ1)
HDAH_ALCSD
[Raw transfer]




ZN_C_11(1ZZ3)
HDAH_ALCSD
[Raw transfer]




ZN_A_3(5EEI)
?
[Raw transfer]




ZN_B_9(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_A_4(5G0I)
?
[Raw transfer]




ZN_A_5(4BZ7)
?
[Raw transfer]




ZN_A_2(5JI5)
?
[Raw transfer]




ZN_A_5(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_A_5(5G0H)
?
[Raw transfer]




ZN_C_14(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_A_5(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_D_8(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_A_5(1ZZ0)
HDAH_ALCSD
[Raw transfer]




ZN_C_7(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_A_2(5G0G)
?
[Raw transfer]




ZN_D_12(1ZZ3)
HDAH_ALCSD
[Raw transfer]




ZN_B_6(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_A_9(1ZZ3)
HDAH_ALCSD
[Raw transfer]




ZN_D_19(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_B_13(5G0I)
?
[Raw transfer]




S17_B_12(2VCG)
HDAH_ALCSD
[Raw transfer]




CF3_B_18(2GH6)
HDAH_ALCSD
[Raw transfer]




CF3_A_17(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_A_3(5EEF)
?
[Raw transfer]




CF3_C_19(2GH6)
HDAH_ALCSD
[Raw transfer]




CF3_D_20(2GH6)
HDAH_ALCSD
[Raw transfer]




SHH_A_17(1ZZ1)
HDAH_ALCSD
[Raw transfer]




222 HHSearch 65.2426% -39 - C6 -5JI5 4.9 ?
235 HHSearch 65.0027% -42 - C6 -5EDU 4.8 HDAC6_HUMAN
229 HHSearch 64.9224% -74 - C6 -4A69 5.1 HDAC3_HUMAN
226 HHSearch 63.5224% -68 - C6 -4LY1 5.6 HDAC2_HUMAN
237 HHSearch 61.8725% -46 - C6 -4BZ7 3.4 ?
223 HHSearch 61.6021% -30 - C6 -5EEI 5.4 ?
238 HHSearch 61.5424% -39 - C6 -1C3P 5.7 ?
225 HHSearch 61.2224% -44 - C6 -5G0G 4.9 ?
4 PsiBlast_PDB 60.9532% -17 - C7 -5G0G - ? -
22 PsiBlast_CBE 60.6832% -16 - C7 -5EEF - ? -
236 HHSearch 60.4922% -38 - C6 -4ZUR 5.3 APHA_MYCRA
234 HHSearch 60.1724% -62 - C6 -4BKX 4.6 HDAC1_HUMAN
21 PsiBlast_CBE 60.1432% -12 - C7 -5G0I - ? -
232 HHSearch 60.0921% -27 * C6 *5G0H 5.0 ?
3 PsiBlast_PDB 59.6532% -12 - C7 -5EEF - ? -
1 PsiBlast_PDB 59.5432% -15 - C7 -5G0I - ? -
2 PsiBlast_PDB 59.2932% -15 - C7 -5G0J - ? -
230 HHSearch 58.0820% 6 - C6 -3MEN 5.2 APHA_BURP1
228 HHSearch 54.9224% -44 - C6 -5DC8 4.9 HDAC8_HUMAN
8 PsiBlast_PDB 54.9136% -22 - C7 -2GH6 - HDAH_ALCSD -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NH4_A_5(5EEF)
?
[Raw transfer]




NH4_B_11(5EEF)
?
[Raw transfer]




3YP_C_7(1ZZ3)
HDAH_ALCSD
[Raw transfer]




SHH_A_17(1ZZ1)
HDAH_ALCSD
[Raw transfer]




3YP_A_5(1ZZ3)
HDAH_ALCSD
[Raw transfer]




TSN_A_4(5EEF)
?
[Raw transfer]




3YP_D_8(1ZZ3)
HDAH_ALCSD
[Raw transfer]




S17_A_8(2VCG)
HDAH_ALCSD
[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




N4R_B_20(5G0I)
?
[Raw transfer]




SHH_A_6(5EEI)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




N4R_A_10(5G0I)
?
[Raw transfer]




20Y_A_10(4LY1)
HDAC2_HUMAN
[Raw transfer]




TSN_B_10(5EEF)
?
[Raw transfer]




TSN_B_3(5EDU)
HDAC6_HUMAN
[Raw transfer]




NH4_B_12(5EEF)
?
[Raw transfer]




NH4_A_6(5EEF)
?
[Raw transfer]




S17_D_23(2VCG)
HDAH_ALCSD
[Raw transfer]




NH4_A_5(4ZUR)
APHA_MYCRA
[Raw transfer]




7XA_A_6(4ZUR)
APHA_MYCRA
[Raw transfer]




B3N_A_8(4BZ7)
?
[Raw transfer]




S17_C_17(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_A_5(3MEN)
APHA_BURP1
[Raw transfer]




ZN_B_3(4BKX)
HDAC1_HUMAN
[Raw transfer]




ZN_A_5(5DC8)
HDAC8_HUMAN
[Raw transfer]




ZN_A_5(4A69)
HDAC3_HUMAN
[Raw transfer]




ZN_B_9(5EEF)
?
[Raw transfer]




ZN_A_3(4ZUR)
APHA_MYCRA
[Raw transfer]




ZN_A_4(4LY1)
HDAC2_HUMAN
[Raw transfer]




ZN_B_4(5EDU)
HDAC6_HUMAN
[Raw transfer]




ZN_A_5(1ZZ1)
HDAH_ALCSD
[Raw transfer]




ZN_C_11(1ZZ3)
HDAH_ALCSD
[Raw transfer]




ZN_A_3(5EEI)
?
[Raw transfer]




ZN_B_9(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_A_4(5G0I)
?
[Raw transfer]




ZN_A_5(4BZ7)
?
[Raw transfer]




ZN_A_2(5JI5)
?
[Raw transfer]




ZN_A_5(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_A_5(5G0H)
?
[Raw transfer]




ZN_C_14(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_A_5(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_D_8(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_A_5(1ZZ0)
HDAH_ALCSD
[Raw transfer]




ZN_C_7(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_A_2(5G0G)
?
[Raw transfer]




ZN_D_12(1ZZ3)
HDAH_ALCSD
[Raw transfer]




ZN_B_6(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_A_9(1ZZ3)
HDAH_ALCSD
[Raw transfer]




ZN_D_19(2VCG)
HDAH_ALCSD
[Raw transfer]




ZN_B_13(5G0I)
?
[Raw transfer]




S17_B_12(2VCG)
HDAH_ALCSD
[Raw transfer]




CF3_B_18(2GH6)
HDAH_ALCSD
[Raw transfer]




CF3_A_17(2GH6)
HDAH_ALCSD
[Raw transfer]




ZN_A_3(5EEF)
?
[Raw transfer]




CF3_C_19(2GH6)
HDAH_ALCSD
[Raw transfer]




CF3_D_20(2GH6)
HDAH_ALCSD
[Raw transfer]




SHH_A_17(1ZZ1)
HDAH_ALCSD
[Raw transfer]




250 100.00100% 0 - C- -M250 - -
249 100.00100% 0 - C- -M249 - -