@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : S8GEI3_TOXGM: (2017-06-15 )
MVDASEGSSKEEEAGHVPHVEVESARNCGEAWTKTRSSPFTSVWHISGETGAAAGHCREGSLHKLIATNNISGVRLWLSNPFCRSMINDLNHAGETPLHVAVQCCSPRILSLLLDPPPLQISPSLLASCSLRLPRPLAGTAEPPSGAPASSNEGAPLGGSAEEVADAGVASLKTQQPFSAETAISSVVATDAAAACDQLAMAAAARVDFSLSVDGIPTLHLLIGRTAFGGARGEDAMECLKRILLHIGRFQPGAADRCPRCSPGKTKPTACGRERSGVKAESVAFECGDHVSDPQAGGLRESQISHPGLGGQQEYGCQCCGGTLGSLDSRRKKEMREARDRVCCPEVFTVERQTSAADSVMLDLEEMDLQGRTALHLACSFGVSPVAELLLHAGASPWARRLGLGQLPIHSAIDADDPACCLLLLRHTLPCRFFVNFSCICGRRCDSGATGGRQAPVNTLALKRSPAATKFVFQLVRRCVRRGAWRCFRALLLYPTESSACFSGSVEGGDKAEGLQPGGSNSAASRRCEVENLGRKEDACERQGGRVRCVTKDVAASWCSGLHGLLDGEVRAWLYLREEARRAGALLDLKEQLQRVVTTSPACCQAAAASWTAVPASPCDGHKFGVKSESETGLLLSLFGTHGDAEGKTAKRGEGRTMVVTHALCLEHLPLPEPADMPLKRHKLMQRFPENPSRLEVVTSDRCGILRTREFSPLLWMDDPMPASLSDILRVHSMSYIARLKLRVEDAFGISTRLPSLSPPLSYAPGQTAAAATATGAEALAAAAAALDSKLQKEQYEKQKRQQIENVGSAGRYSFVFADGDTPVTCFSWAAAVHAAGAVIAAVDAVCERKCRNAFCAVRPPGHHLGNWGAAQTASNQLTDEDIAAGSQGFCLLNNVAIGAAYAKYNYARKGIRRIAIVDFDVHHGNGTEQIIRNVGMKIRKVKQPQGAALRLYRRAADELRGTSTLVSSNLSRDAPAAGDNSAHCGPDPCEVDATGSEKTPSQGYHVGDGGKVSAALPPQLAGPVDVPQWMGWRDERDAEELFFASIHAFDGTFYPGTGADCEDFSGPVVINVNILPHPTGPSLHKCCRCQKCSGRPCAGGAHRRCPRGRDAGVSYANASPMEVEMAARTPDVPVQVSWSCHFCRHPTLAPSSVAARRLFLKRIIRPLLRFGPDLLFISAGFDGHAQDQIGGAFGGFAEEDFRFFTHALVRCAERTCEGRVVSVLEGGYSVSGGVSSTLAASVKEHLRGLMRTPAGGSCFAGALGSEQPGNEAHEAAPRESSLSFPGKNGWEEDIEVGDAATSDVTASDVEESWQLIEGENTGMDGADSSDALLDEGSRRNGSDDGPSADALSHRRPREAKTLDGCASPGPHSSTETASEASGHCEREHSADFPPGADACRSRGTEHRSPTNAFASSASAPSAQRYGDSATVNNNDLLTLRALCRGTDGCLR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_15(4A69)
HDAC3_HUMAN
[Raw transfer]




E1Z_A_2(5G0H)
?
[Raw transfer]




5OG_B_6(5EEN)
?
[Raw transfer]




TSN_B_10(5EEF)
?
[Raw transfer]




5OG_A_10(5EEN)
?
[Raw transfer]




TSN_A_5(5EEK)
?
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




SHH_A_17(1ZZ1)
HDAH_ALCSD
[Raw transfer]




TSN_B_3(5EDU)
HDAC6_HUMAN
[Raw transfer]




TSN_A_4(5EEF)
?
[Raw transfer]




GOL_A_12(4BZ7)
?
[Raw transfer]




GOL_A_8(5EEI)
?
[Raw transfer]




7XA_A_6(4ZUR)
APHA_MYCRA
[Raw transfer]




OTF_B_7(5A2S)

[Raw transfer]




EDO_A_6(5G0H)
?
[Raw transfer]




GOL_B_19(5EEI)
?
[Raw transfer]




GOL_C_26(4BZ7)
?
[Raw transfer]




SHH_A_6(5EEI)
?
[Raw transfer]




I0P_C_17(4A69)
HDAC3_HUMAN
[Raw transfer]




GOL_A_10(4BZ7)
?
[Raw transfer]




LBH_B_11(5EF8)
?
[Raw transfer]




N4R_B_20(5G0I)
?
[Raw transfer]




B3N_A_8(4BZ7)
?
[Raw transfer]




N4R_A_10(5G0I)
?
[Raw transfer]




EDO_A_10(5G0H)
?
[Raw transfer]




EDO_A_5(5JI5)
?
[Raw transfer]




B3N_C_24(4BZ7)
?
[Raw transfer]




EDO_A_7(5G0H)
?
[Raw transfer]




5OJ_B_10(5EF7)
?
[Raw transfer]




GOL_A_9(4A69)
HDAC3_HUMAN
[Raw transfer]




GOL_C_12(5DC8)
HDAC8_HUMAN
[Raw transfer]




EDO_A_13(5G0H)
?
[Raw transfer]




5OJ_A_6(5EF7)
?
[Raw transfer]




EDO_B_22(5EEI)
?
[Raw transfer]




EDO_A_6(5JI5)
?
[Raw transfer]




7XA_B_11(4ZUR)
APHA_MYCRA
[Raw transfer]




GOL_B_13(4ZUR)
APHA_MYCRA
[Raw transfer]




GOL_A_11(4BZ7)
?
[Raw transfer]




N4R_A_10(5G0J)
?
[Raw transfer]




B3N_B_16(4BZ7)
?
[Raw transfer]




GOL_B_19(4BZ7)
?
[Raw transfer]




B3N_C_25(4BZ7)
?
[Raw transfer]




EDO_A_9(5G0H)
?
[Raw transfer]




FKS_A_13(5EFH)
?
[Raw transfer]




EDO_A_4(5JI5)
?
[Raw transfer]




20Y_A_10(4LY1)
HDAC2_HUMAN
[Raw transfer]




TSN_A_10(5G0G)
?
[Raw transfer]




EDO_A_14(5G0H)
?
[Raw transfer]




157 HHSearch 72.9329% -40 - C3 -5EDU 3.8 HDAC6_HUMAN (first)
150 HHSearch 72.5040% -24 - C3 -5JI5 2.9 ?
148 HHSearch 69.5127% -32 - C3 -5G0G 5.8 ?
149 HHSearch 68.5726% -39 - C3 -1ZZ1 4.3 HDAH_ALCSD
153 HHSearch 65.4025% -24 - C3 -5G0H 5.2 ?
152 HHSearch 63.9427% -32 - C3 -3MEN - APHA_BURP1
142 HHSearch 63.6825% -23 - C3 -5EEI 4.3 ?
158 HHSearch 61.7624% -4 - C3 -4ZUR 3.4 APHA_MYCRA
145 HHSearch 59.2819% -14 - C3 -4A69 2.8 HDAC3_HUMAN
151 HHSearch 57.6017% -5 - C3 -4LY1 6.8 HDAC2_HUMAN
146 HHSearch 57.3317% -2 * C3 *4BKX - HDAC1_HUMAN
143 HHSearch 56.2618% -17 - C3 -5DC8 2.5 HDAC8_HUMAN
154 HHSearch 51.0616% -19 - C3 -4BZ7 3.6 ?
170 Fugue 50.7219% 1 * C1 *5G0J 2.0 ?
155 HHSearch 50.6018% 7 - C3 -1C3P - ?
173 Fugue 47.4216% -57 - C3 -4BZ7 3.5 ?
167 Fugue 45.4221% -44 - C3 -1ZZ1 - HDAH_ALCSD -
168 Fugue 44.8021% -2 - C3 -3MEN - APHA_BURP1 -
53 PsiBlast_CBE 44.5332% -67 - C4 -1ZZ0 - HDAH_ALCSD -
47 PsiBlast_CBE 43.9532% -65 - C4 -1ZZ3 - HDAH_ALCSD -