@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_02_0540: (2018-03-07 )
MIKWNELRLQRRTSQTPLEENRSCSSDESFSLASIWTPNREQELHVLEDRISFSVFELEGVYLNPLLVSWSKPRLRSLVADVAATWAKEGPYSAEFDCISSRLFDAISTEQTCQLRSTCLLSVRQWLGSAQHRWDVTCVLIALLTVSILCIVFLAVFGRTQAVCVVFSTMLSVAVVLMYVVAVFVLHHNTYADAASRYFREEVVRAAQKKMEEEEMAEKRDVGSRSGYRHRGAVKTSRDAADNGCRGYTAGDDDTGVDDEYMEDEISIAVRNLRALTEGSTHPVTNAPPYYRLSDRPHSGKCDNGGAGGGFEDDMTLADGNYASLTSRSLQAGDKAKQQFEEDRENRLLLSRGTFEQHQAHMDQQESHRVHERMNAQQALRPTKQATPSSTSGATGAQTRPSTADSGGSGRQEQLTRGGRDGKKIVMQEQQPLQQLADLPENVNVTALLFCRNAGVLSQVASSLWERNFMLLRVSNLQALNKFNRGSERFGVVLIHAPDVAEGSAELETALSWLQVERRPVFFFSRSAMAYPASVPFSARLLVPFSSTSLNALLLAGIGVESEHGCVSSPLLPQQEQERHQQQCPSQPFQVPPYTLGRRLGGGAFGNVFEAEMEHTGARCAVKRMYLKEDSNQDEEQQVNSGVAGACAGGSGTLAAGANSATSPRAAAVEEEVGGATTAVGSQLRDIAQEVEIMSSLQHPNIVRYYYCERDDNCISIFMELCTGGSLRSLIHSGKLVNPPEIKHLLREIISAVSYLHNMRIVHRDLKPDNVLFRQGHIKITDFGTAVHKHGGDLRLIRGTFAYMAPEILVGDPYGRACDVWSIGCIAAEVLSVELPQHALGLPEMCDYYRAMGENSELPIECDVPGVRDFLLACLQRNPNQRSTAAELFYHPILQARDTSIHDWMVEVVARRRRMQQQQQALHRNGLGSRTGGGAGGLGGNHQVSSNGPNNNGGMNCANAGDRFDLHSVGSAQSLDSSKLV

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IE4_A_3(4BIC)
M3K5_HUMAN
[Raw transfer]



IE8_A_4(4BID)
M3K5_HUMAN
[Raw transfer]



IE6_A_4(4BIE)
M3K5_HUMAN
[Raw transfer]



76A_A_2(2E9N)
CHK1_HUMAN
[Raw transfer]



STU_A_3(2CLQ)
M3K5_HUMAN
[Raw transfer]



8GV_A_4(5UOR)
M3K5_HUMAN
[Raw transfer]



IEO_A_3(4BIB)
M3K5_HUMAN
[Raw transfer]



GOL_A_9(4PF4)
DAPK1_HUMAN
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



GOL_A_6(4GV1)
AKT1_HUMAN
[Raw transfer]



BH9_A_3(4BHN)
M3K5_HUMAN
[Raw transfer]



STU_A_2(4MVF)
CDPK2_PLAFK
[Raw transfer]



ANP_A_2(5DZC)
?
[Raw transfer]



8V7_A_3(5V24)
M3K5_HUMAN
[Raw transfer]
48 Fugue 70.8319% -25 - C1 -2ACX - GRK6_HUMAN -
39 HHSearch 68.9829% -69 - C1 -4B4L - DAPK1_HUMAN -
29 HHSearch 67.3029% -72 - C1 -2X0G - DAPK1_HUMAN -
42 HHSearch 67.0829% -72 - C1 -4PF4 3.7 DAPK1_HUMAN
43 HHSearch 65.9028% -71 - C1 -2BDW - KCC2D_CAEEL -
22 HHSearch 64.2530% 0 - C- -2WEL - KCC2D_HUMAN -
40 HHSearch 64.1927% -70 - C1 -4GV1 2.9 AKT1_HUMAN
25 HHSearch 63.8927% -70 - C1 -3C0G - CSKP_HUMAN -
35 HHSearch 63.7429% -83 - C1 -4XBR - INKA1_HUMAN (first) -
28 HHSearch 63.2327% -46 - C1 -2Y7J - PHKG2_HUMAN -
33 HHSearch 62.4927% -47 - C1 -2Y7J - PHKG2_HUMAN -
24 HHSearch 61.6727% -65 - C1 -3C0I - CSKP_HUMAN -
26 HHSearch 59.4228% -39 - C1 -2X4F - MYLK4_HUMAN -
49 Fugue 58.6618% -8 - C1 -3C4Z - RK_BOVIN -
34 HHSearch 57.6229% -74 - C1 -5J5T 5.9 M4K3_HUMAN
11 PsiBlast_PDB 57.6131% -60 - C1 -2XUU - DAPK1_HUMAN -
14 PsiBlast_PDB 57.1730% -58 - C1 -2X0G - DAPK1_HUMAN -
13 PsiBlast_PDB 56.9330% -61 - C1 -4B4L - DAPK1_HUMAN -
15 PsiBlast_PDB 56.7330% -65 - C1 -4TL0 - DAPK1_HUMAN -
46 Fugue 56.6721% 12 - C1 -1KOB - ? -
3 PsiBlast_PDB 52.6733% -20 - C1 -4BHN 5.5 M3K5_HUMAN
10 PsiBlast_PDB 48.3733% -14 - C1 -4BIE 4.2 M3K5_HUMAN
4 PsiBlast_PDB 47.0935% -21 - C1 -5V24 4.6 M3K5_HUMAN
5 PsiBlast_PDB 46.9735% -34 - C1 -5UOR 6.2 M3K5_HUMAN
8 PsiBlast_PDB 46.8633% -16 - C1 -4BIC 4.3 M3K5_HUMAN
9 PsiBlast_PDB 46.7833% -18 - C1 -4BID 5.6 M3K5_HUMAN
7 PsiBlast_PDB 46.1533% -17 - C1 -4BIB 3.7 M3K5_HUMAN
6 PsiBlast_PDB 45.6935% -12 - C1 -2CLQ 5.6 M3K5_HUMAN