@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_04_1230: (2018-03-07 )
MPETSSEVAPAIKSIFQGRFFLTKLLGKGGFGEVYAAVQTSNNEMVAVKMEKNNGRNSFLFHEARVMQDIQKTPTKDGISGIATLKYFGQEGDYRMLIMSMHGASLEDFHERLGRFSLKTTVMLAGQILSRLEYIHSVGYVHRDLKTDNFLVGKGSFSNRIFMIDFGLSSKFIGSDGKHRDMFTGRYFLGTSRFASLRTHQGYSQSRRDDLEQLVYIMIYMYRGRLPWSGLNIKDLSAKERKIGQIKADLSYSQICAKCPQVFEHLLFYSRNMEFAETPQYDMCHALLQSVLDSMSPRETMDYVFDWNVPASKPARQSLSPRDEIAPANANAANQPNMLSGADGKGMFSGFGSSNPPENIFSIGGHGA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

15G_A_3(4HGT)
KC1D_HUMAN
[Raw transfer]



EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]



PGO_A_9(2IZR)
KC1G3_HUMAN
[Raw transfer]
26 HHSearch 86.4837% -48 - C1 -5FQD - KC1A_HUMAN -
23 HHSearch 85.6137% -42 - C1 -3SV0 - ? -
28 HHSearch 85.1937% -40 - C1 -4TWC - KC1D_HUMAN -
16 PsiBlast_PDB 84.6936% -39 - C1 -1CKI - KC1D_RAT -
1 PsiBlast_PDB 84.0236% -59 - C1 -5FQD - KC1A_HUMAN -
19 PsiBlast_PDB 83.8736% -39 - C1 -4TWC - KC1D_HUMAN -
9 PsiBlast_PDB 83.2736% -39 - C1 -3UYT - KC1D_HUMAN -
8 PsiBlast_PDB 83.0836% -39 - C1 -5W4W - KC1D_HUMAN -
29 HHSearch 82.8337% -39 - C1 -4TWC - KC1D_HUMAN -
7 PsiBlast_PDB 82.6036% -45 - C1 -4KBK - KC1D_HUMAN -
2 PsiBlast_PDB 82.5636% -40 - C1 -3SV0 - ? -
3 PsiBlast_PDB 82.3836% -42 - C1 -4TN6 - KC1D_HUMAN -
22 HHSearch 82.0835% -56 - C1 -2IZR 3.1 KC1G3_HUMAN
15 PsiBlast_PDB 81.9336% -37 - C1 -1CKJ - KC1D_RAT -
4 PsiBlast_PDB 81.7736% -34 - C1 -5MQV - KC1D_HUMAN -
12 PsiBlast_PDB 81.5436% -41 - C1 -4HGT 5.9 KC1D_HUMAN
17 PsiBlast_PDB 80.8536% -37 - C1 -4KBC - KC1D_HUMAN -
47 Fugue 80.7930% -29 - C1 -4XHG - ? -
18 PsiBlast_PDB 80.6436% -40 - C1 -4TW9 - KC1D_HUMAN -
20 PsiBlast_PDB 80.1836% -39 - C1 -4HNI - KC1E_HUMAN -