@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_05_0390: (2018-03-07 )
MSSRSYYSGSGTTAVVPHTISISTAETTPSQAPSSHTEQPSSDQQHESSLHQATASLPMSLNSTMNNKGASAAAAAAAAAPSSHGGDSHSIGAAAKASGSERANWNNPSFAAALRNSSGSINVDGYPPAQAHQQPSHPSLLSHSTDVDDEGDGAQHAAVNEPLEYCGVRLLPGVEQIDFDEGYYVGTIDENGEMAGYGKATWHSGDTYEGEWLNGMMHGKGTYTWADGDYYQGNYVRGRMEGRGEMKDATGLYTGEWADDMRQGYGRMLYAGGNVYEGEWLAGMRHGSGKLVEPAAHVTYEGEFNRNEKEGRGVQTNSDGDVYEGEFARGKPNGRGTYLWADGARYIGMFKDGVKHGDGCEWLANGDWVAGLFVDGEHVDSQSTRHKATVLTPDSSDADGGSEDGAGDGGAGGSRGSIGLSESTAAAVLAPLDAEKLRRIADQVHAPSFSMNVSAAAMRSLRSSLRKNSSSHYQDFSGPGGVTIEEASSPFLRSLAAPQMLLDDSDLEGWTPLKTIGKGSFGAVYTALLRNGRTVCCKVIELGTVESEEEMEKLRNEIALMRRLRHPNCVQYYGSLEDKVQNTLNIFMEYVSGGTLTSFVAKFKSIPLETLRQWVYQMVCGVKYLHECGIVHRDIKGDNVLVSVDGIVKLADFGCSKAIDDVCSATHGCSTMVGTPYWMAPEVIKCEAGGYGVKSDIWSIGCTIVEMLTGKPPWPECNSMWAAVYKIANSTGLPTEIPADIDPELMDLLQRCFERNPKLRPTAADMLSHPFLAKVTEGVASPLEKSGRK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IE6_A_4(4BIE)
M3K5_HUMAN
[Raw transfer]



STU_A_3(2CLQ)
M3K5_HUMAN
[Raw transfer]



ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



ATP_A_2(4XBR)
INKA1_HUMAN
[Raw transfer]



STU_A_3(4BF2)
M3K5_HUMAN
[Raw transfer]



IE4_A_3(4BIC)
M3K5_HUMAN
[Raw transfer]



4T6_A_3(4ZY6)
PAK1_HUMAN
[Raw transfer]



4T3_A_3(4ZY4)
PAK1_HUMAN
[Raw transfer]



8GV_A_4(5UOR)
M3K5_HUMAN
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



GOL_A_4(4ZLO)
PAK1_HUMAN
[Raw transfer]



8V7_A_3(5V24)
M3K5_HUMAN
[Raw transfer]



4PV_A_3(4ZLO)
PAK1_HUMAN
[Raw transfer]
39 HHSearch 74.5836% -53 - C1 -4XBR 5.1 INKA1_HUMAN (first)
41 HHSearch 70.6635% -51 - C1 -5J5T 6.7 M4K3_HUMAN
7 PsiBlast_PDB 69.9934% -23 - C1 -4APC - NEK1_HUMAN -
17 PsiBlast_PDB 69.6935% -11 - C1 -2C30 - -
8 PsiBlast_PDB 69.4834% -24 - C1 -4B9D - NEK1_HUMAN -
23 HHSearch 69.0626% -23 - C1 -2Y7J - PHKG2_HUMAN -
20 PsiBlast_PDB 68.4835% -15 - C1 -4KS7 - -
26 HHSearch 67.3326% -23 - C1 -2Y7J - PHKG2_HUMAN -
40 HHSearch 66.7728% -42 - C1 -4WOT - ROCK2_HUMAN -
47 Fugue 65.3026% -32 - C1 -2RIO - IRE1_YEAST -
11 PsiBlast_PDB 64.4236% -40 - C1 -4ZJJ - PAK1_HUMAN -
10 PsiBlast_PDB 64.1136% -35 - C1 -4ZJI - PAK1_HUMAN -
38 HHSearch 63.0626% -43 - C1 -3C0I - CSKP_HUMAN -
16 PsiBlast_PDB 63.0534% -53 - C1 -4USF - SLK_HUMAN -
15 PsiBlast_PDB 62.5334% -54 - C1 -2JFM - SLK_HUMAN -
14 PsiBlast_PDB 62.4234% -55 - C1 -2J51 - SLK_HUMAN -
18 PsiBlast_PDB 62.3034% -58 - C1 -2JFL - SLK_HUMAN -
19 PsiBlast_PDB 61.8736% -34 - C1 -4ZLO 5.2 PAK1_HUMAN
13 PsiBlast_PDB 61.1936% -26 - C1 -4ZY6 5.7 PAK1_HUMAN
37 HHSearch 61.0126% -42 - C1 -3C0G - CSKP_HUMAN -
3 PsiBlast_PDB 59.4339% -12 - C1 -5V24 6.0 M3K5_HUMAN
1 PsiBlast_PDB 57.7039% 7 - C1 -2CLQ 6.1 M3K5_HUMAN