@TOME V2.3
(Mar 2018)

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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_06_0660: (2018-03-07 )
MQPPQLKPALAGTADVALPAAFAGPSMTYDGSSGKCENLDSNPRSCEGDEDAGTYSADYRVYQQRPDDTHNATRRRSSSVGQLSVEQVLTSVAPLSSPPQPMAARTRSSHLPHGNGTSADRSASVSLPPAYPDRFSTHAVGDCPAHHGTVSSSWCCDSTCATRTGEANGKVPPEGDGCSERFSPHRIGSALLSSTAETAPGYLLALIGVVTGMLLFLPWSSNPVHIALMVLSSLVGCVCGLLYWISERRWYRRWRHGFYDASGAAAASCSAGGARGWHVESAVGSAGPRYHDHDADDEVSSVGMCCCAGCVSHLIDRQHFRVVLPTAQLLLLGTFVLVSPQVMATWTAPMASTTGRGGGAILADRGAGHAARYGATLYPVEAVWKTCLLHAWIGMRFSLPLLWSLLVGLVHMAVLLAQYQHAGPGTLLTLVVWMSVPLLCFAFAMCITRPRPAVVEEQQHHQLLRGRASGGGAAGYSASYGAGVGEPLPPFVNFFIGRRRDALEATCASVPYSSPSTVTTAAPAPATQYSAHPSRRVVLPPPPVAAYSPASYAQMFSAEGIDGSYLARLKVGEFGSLVRGGSGGVGIAAARYPQANYGGLGTVVPSRYESDQRLIAPQRPVRPRYNAAARSPAPSVQQGAPLLAPKFFDSAGVPPHDDLIGLATPHDITLPSQHGRARDLSAPLYSPSSLSQAVREARYEPAHYPVNNMDEVTYPTTSAAAMLPSSGDGTHPSLPLPQTSRQLAPPSRLSIVSSSTPSTMLVSNLEPAPQPRRQLRKHVQQAAAGEVEEAGAFRDDAVDSDGAAAAIVPADSSHQETRQHRRTGSATAKGQRTWSGVAATAAAAKSMSAAAPAADDDGCANGVDVPNAPVHGRGDDGEEWDSEPPLPAGTSLEDACAPYLVLDAALVIVDVGPSLCRLLGTTVDAVLFRRLPDVLAWLDVVERETAVMLVSAVAQPLRTAAAAVRGEKRGAGAHSTREEKAKKGKDMKRRHSGAQDGMRDNHHDTNENRNAPSGAAKQLQKPSEMEVRDNVAEGAPVRRITLRGHCPYYAKASGSTREISAGRCSRRPPFALCFDVWAERLAAPAPSTAGSWRRHRSSAVGGGRPLPTPFVIILRRPLLHGLCDALPLPVALVHPRTGEVLCWNRYAARLTGCTAYDMLGTPAYGSFVYEGLPGAATTAASQGGFSSTGRHLPPPPPSPSVEFASSTHRRQQSSNTAALSAATAAGTVPDGEVASNGFAPPPVKSTSPTTAALLLSSQQTTSTAFSPLQNARLQRQHGGAGSPTFVDQASPPPHAAGLYGTFTVVASQQHRDTPLPGFFYVPCTRAAAAVAGVPLSAVGHSGELAMTTAIGGGGARPSSSSSTGGGPHQISSLQLPWSLAGRGGTVAAAAGHADRVPSQLTAASQSPLSFGVGGGGGDNKNSTSGVAVGARCPRPPPPPPLAAGLDRGTDPYDEAGVATAFETDGSKEAQGDGDEDVMAAPYCSSPVMVHGLLFRATLRPLRGVLCSEEGGVVENQLGGPLRTSASAVEGEHTGGRGAEGNPFFNQPPRAAHEEDSAAVEGKDAEEGQALAREKNMQAHGDDKSGSDDSVEALLSERQPHHRHHRLHRTAAGARMPNSECEEDSGAEDQSDMDDDDDDDTPFDEDDLPKAMAGTMNGGLTLAATLEQLFATKAMACNFGLDKEPAACPRRSAASTVTTTATAASGALLSSELLPQYSLREALQQLAASESPLLLTFSEPPLYATTCASAEALLQERRLSHHRVSSPSPDEHGYSGVLTHANNGGVAAAASGGDCTSVPESYLGTPQAPFLRRQRPQVPALWGDGSSSLQFVAAVKEAVDSYRESIEEDSSGYTDLLGLLSLSGANGGCCPSSGYAARNSSSSLTPTSFGGAPDAAVTTAITADAVRQLRLLKSLSDQLLQATAAYNRTRQSMSSTTCGLSGGCGCGGVAARVSPSSSSPSLSLGLFAAPSVPDADAAHERHLHARRHGSATTPSPHKDPPAGGPLGFSAHQSPFQPPPPPPHLAFTSEEARGAHRRLQGGGPHRRQPGEPAASASTGGSGAHTGIYRDPNSTPFSVASEDVTGVAPSAVGDSRNSALKEPPPPPHHGATRTSGSGGRRDIQDGGASPVKSRPRHAAKSSTASAPLKVSRGRHTGARHGRRGGAGAGASTPAPSPPLVPLDAAVDVAKESRSSGYMGEISGSTPSSASPCGVGGSGRTAAAAPAATSSLNASTLLVAAGSVPAMSTPRPHATGASASALDVATPQTELHSSPRPCDTVVASGEGEASGRGGGAGEDAAAAGGVTSRLTTSPRYQGSLLLSPSLAAAEMGELEASYGTESRQQRPQHRSSPNIISGAGSGRGATPVKRDASPRRRSSAVYRRESSLDVLPSAPLGSGSFRGNGGLVPTSSSASPSAGAGAGGQGTGSPSPHPARTGSGSLNANANAAAAATAAVRSTPRRPGEGAVWAVLVSRDEATIPSCCISVNLGDEFRLGRSSKCTAVVSDSFVSSTQFSIVRTVSASTTAQDSQSPGSGRSERGARRNKAFTVTLYDRSANGTYVNVKKLGKDKSCVLRDRALITFRLSTSQFFLGFVFMLTDERGVPLDDRTGMGGGSGLRSLLDARLSPQPQTGRRTNASSTGGGGKESSSSQNTVMASPNALSTSAARRNTPRALSTPDNSSFASGTPNGSRRAGGGAPRSSRHAHRETIEWKIGEEMLGKGGNAEVYLGINLTNGQLIAVKRVRLPTFAHGSDAEQDPEAKAILQQYRSLQEEISVLSKATHPNIVQYYGSSQNSTYFNILLEFVPGGSLRHLLDNFGALSPGVILSYVHQALEGLAYLHRHNIVHSDFKAANILITEKGKVKLTDFGTARLLTRPHATAARGGGEAQSVTSRTTPGQRKDDPVSVGAGGTLHIAGTLRWMDPALFHNPHSSGAADVTAAATAKDSSDKLGGPTKAGDIWSVGCTMIEMMSGEAPWFEYDFESEEQIVNLLTYTAEPPEIPECPECPDLVTIAQTCLKMDPARRPTCEELLRIVEEATARLQAQSTSPSVSPSREVSQQHPAVPGSVSGAGTGLRSSSTLLCPQMEPGTNSAFASLTANPAVAAYGPGTDDRRRAERVGRPSDSTPMSFAVGGDGGSSAQLSARDAALPTVL

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



3JA_A_2(4W8D)
STK24_HUMAN
[Raw transfer]



STU_A_3(2CLQ)
M3K5_HUMAN
[Raw transfer]



IE4_A_3(4BIC)
M3K5_HUMAN
[Raw transfer]



IE8_A_4(4BID)
M3K5_HUMAN
[Raw transfer]



STU_A_2(3CKX)
STK24_HUMAN
[Raw transfer]



IE6_A_4(4BIE)
M3K5_HUMAN
[Raw transfer]



IEO_A_3(4BIB)
M3K5_HUMAN
[Raw transfer]



3FE_A_3(4U8Z)
STK24_HUMAN
[Raw transfer]



0WB_A_2(4G3F)

[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



J60_A_3(2XIK)
STK25_HUMAN
[Raw transfer]



8V7_A_3(5V24)
M3K5_HUMAN
[Raw transfer]



ADE_A_2(3A7I)
STK24_HUMAN
[Raw transfer]



EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]



EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]
22 HHSearch 78.3031% -91 - C1 -4G3F 7.2
40 HHSearch 77.4231% -88 - C1 -5J5T 6.9 M4K3_HUMAN
43 Fugue 77.0029% -6 - C1 -4DN5 5.5 M3K14_HUMAN
18 PsiBlast_PDB 75.8829% -84 - C1 -3A7G - STK24_HUMAN -
14 PsiBlast_PDB 75.5928% -85 - C1 -2XIK 7.6 STK25_HUMAN
23 HHSearch 75.5630% -85 - C1 -4IDV - M3K14_HUMAN -
19 PsiBlast_PDB 75.1729% -82 - C1 -3A7H - STK24_HUMAN -
10 PsiBlast_PDB 74.3829% -82 - C1 -3CKX 8.1 STK24_HUMAN
8 PsiBlast_PDB 74.2229% -84 - C1 -4O27 - STK24_HUMAN -
21 HHSearch 74.1526% 11 - C1 -3I6U - CHK2_HUMAN -
13 PsiBlast_PDB 73.9129% -84 - C1 -4W8D 5.8 STK24_HUMAN
17 PsiBlast_PDB 73.4629% -84 - C1 -3A7F - STK24_HUMAN -
12 PsiBlast_PDB 73.4629% -85 - C1 -4U8Z 6.4 STK24_HUMAN
16 PsiBlast_PDB 73.4129% -82 - C1 -4W8E - STK24_HUMAN -
20 PsiBlast_PDB 73.1029% -81 - C1 -3A7I 5.8 STK24_HUMAN
9 PsiBlast_PDB 72.7729% -84 - C1 -3ZHP - STK24_HUMAN -
45 Fugue 70.1319% -38 - C1 -3C4Z - RK_BOVIN -
31 HHSearch 70.0225% -75 - C1 -2WEL 3.4 KCC2D_HUMAN
38 HHSearch 68.8624% -50 - C1 -2X0G - DAPK1_HUMAN -
29 HHSearch 68.1326% -58 - C1 -3C0G - CSKP_HUMAN -
3 PsiBlast_PDB 63.4431% -13 - C1 -2CLQ 9.7 M3K5_HUMAN
4 PsiBlast_PDB 62.9830% -21 - C1 -4BIB 6.3 M3K5_HUMAN
7 PsiBlast_PDB 62.1830% -24 - C1 -4BIE 6.2 M3K5_HUMAN
1 PsiBlast_PDB 60.9831% -21 - C1 -5V24 7.0 M3K5_HUMAN
6 PsiBlast_PDB 59.7130% -19 - C1 -4BID 7.2 M3K5_HUMAN