@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_07_1030: (2018-03-08 )
MGAPKRLGKYELGRTLGTGNFSKVKIARDTETGKEWAIKVIDKEQLVRERMEEQLKREIAVMKMLRQPNIIELHEVMQTSHHIYLVLELVTGGELFEKIASAKRFDEPTARHYFHQLICGINYCHRQGIAHRDLKPENLLLDANDTLKISDFGLSNLQRTSVSGGTMLQTVCGTPNYVAPEVLKEQGYDGLKADIWSCGVVLFVMMAGYLPFDDENVNALFTKIERGEFRMARHFSADARDLISRMLTVDPQERISLDDVIAHPWFCVDWNPAMLTRGESHSSPNTAQISNAIRNM

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6PV_A_2(5K00)
MELK_HUMAN
[Raw transfer]



6Z5_A_3(5KZ8)
MARK2_HUMAN
[Raw transfer]



24R_A_3(5EAK)
MARK2_HUMAN
[Raw transfer]



6Z2_A_3(5KZ7)
MARK2_HUMAN
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



97B_A_4(3H10)
AURKA_HUMAN
[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]



16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]



B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]



CPS_D_23(4CZT)
CIPKN_ARATH
[Raw transfer]



CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]



EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]



CPS_C_16(4CZT)
CIPKN_ARATH
[Raw transfer]
27 HHSearch 91.7255% 0 - C- -4CZU - CIPKN_ARATH -
11 PsiBlast_PDB 84.3842%-133 - C1 -4CFF - AAPK2_HUMAN -
10 PsiBlast_PDB 83.2042%-134 - C1 -4CFE - AAPK2_HUMAN -
26 HHSearch 82.5556%-107 - C1 -4CZT 5.3 CIPKN_ARATH
8 PsiBlast_PDB 80.2342%-137 - C1 -5ISO - ? -
1 PsiBlast_PDB 79.4757%-109 - C1 -4CZT 2.4 CIPKN_ARATH
3 PsiBlast_PDB 78.1251%-136 - C1 -4D28 - CIPKO_ARATH -
2 PsiBlast_PDB 77.8657%-113 - C1 -4CZU 5.4 CIPKN_ARATH
12 PsiBlast_PDB 77.0144%-142 - C1 -4ZHX - AAPK2_HUMAN -
15 PsiBlast_PDB 76.1943%-137 - C1 -3AQV 7.2 AAPK2_HUMAN
40 HHSearch 75.2644%-134 - C1 -3AQV - AAPK2_HUMAN -
14 PsiBlast_PDB 75.0143%-140 - C1 -2YZA - AAPK2_HUMAN -
7 PsiBlast_PDB 74.2142%-137 - C1 -4RED - AAPK1_HUMAN -
23 HHSearch 73.7144%-140 - C1 -5K00 10.1 MELK_HUMAN
5 PsiBlast_PDB 73.2144%-147 - C1 -3DAE - SNF1_YEAST -
4 PsiBlast_PDB 71.5244%-151 - C1 -3HYH - SNF1_YEAST -
32 HHSearch 70.0942%-120 - C1 -2QNJ - MARK3_HUMAN -
13 PsiBlast_PDB 69.7942% 0 - C- -5EZV - AAPK1_HUMAN (first) -
28 HHSearch 68.6541%-117 - C- -3FE3 - MARK3_HUMAN -
16 PsiBlast_PDB 68.4442%-121 - C1 -5EAK 6.9 MARK2_HUMAN
20 PsiBlast_PDB 67.0742%-134 - C1 -5KZ8 7.4 MARK2_HUMAN
19 PsiBlast_PDB 63.9742%-142 - C1 -5KZ7 7.4 MARK2_HUMAN