@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_12_0016: (2018-03-08 )
MGDHLGSRFTVIEQIGSGNYGSLYRVIDGEAATLADRIIATKKLQDTINHPHVLREVSVQRHAQKCSPHIVKLLHVVPRDRVRAALVLEYVPLDLRTFLNAFYCDQAKSSAPTWCATAGAGEVKSAAPPPCHIPLIYVRRMLRGLIEALHCLHARGIVHRDVKPENILVEPLGLGHPLRCVCPPMGSFGPTGEAAGCWVHAPQCSDPRQEKDATQPMQPRGTLEPCQFFCRNSVALHHELTGDELASAIHRLHCETCRPCPRARAGVGKHPLQQHRDRSDMKTSNSCSQERQADAVDGEGPASVDDDEENKFTAPTPPPLMPDVKLCDFGSARHIGTLRLRSAEEQREELTPGPTTPVYCAPEMMLLQRYGTSVDMWAVGAILFEMLTGEFFLGVGTLRSFSGDVVVQDDYCVMHRLNRMFRHLGTPSVEEWRCIAHPHYYPDEMLAHLPQVRDAALFRCLAQPIATDVSLLPESGDIKPNGDAKTADEQTELSVRPSAETCSFAQAPVNGTTDSHAARASVPPRDMASARHPLNVSDFLYQHIGKSGVDFLRSLLRYDPAKRMTSAEALRHPFLSPEVANM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_D_4(1J1B)
GSK3B_HUMAN
[Raw transfer]



ADP_A_4(4NM5)
GSK3B_HUMAN
[Raw transfer]



EDO_A_6(2WEL)
KCC2D_HUMAN
[Raw transfer]



EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]
25 HHSearch 80.7031%-108 - C1 -1UA2 - CDK7_HUMAN -
44 HHSearch 80.2531% -69 - C1 -4NM5 4.0 GSK3B_HUMAN
21 HHSearch 80.1532% -67 * C1 *1J1B 6.6 GSK3B_HUMAN
53 Fugue 67.9916% -15 - C1 -2RIO - IRE1_YEAST -
35 HHSearch 56.4827%-122 - C1 -4AU8 - CDK5_HUMAN -
9 PsiBlast_PDB 55.6227% -79 - C1 -2DS1 - CDK2_HUMAN -
29 HHSearch 54.3227%-148 - C1 -3EB0 - ? -
48 Fugue 53.0016% - - C1 -3H4J - SNF1_SCHPO -
18 PsiBlast_PDB 49.9226% -44 - C1 -5UQ1 - CDK2_HUMAN -
41 HHSearch 49.5826% -57 - C1 -5G6V - -
19 PsiBlast_PDB 48.6626% -43 - C1 -5UQ2 - CDK2_HUMAN -
33 HHSearch 48.6125% -66 - C1 -1KOB - ? -
42 HHSearch 48.3326% -52 - C1 -5G6V - CDK16_HUMAN -
46 Fugue 48.2314% 26 - C1 -1KOB - ? -
45 Fugue 47.6212% -8 - C1 -1TKI - TITIN_HUMAN -
1 PsiBlast_PDB 46.0729% -35 - C1 -3G33 - CDK4_HUMAN -
14 PsiBlast_PDB 45.9726% -33 - C1 -4ERW - CDK2_HUMAN -
43 HHSearch 45.2524% -67 - C1 -2WEL 3.1 KCC2D_HUMAN
22 HHSearch 45.0827% -46 - C1 -5BYZ - MK07_HUMAN -
10 PsiBlast_PDB 44.9828% -30 - C1 -4EON - CDK2_HUMAN -