@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_15_0810: (2018-03-08 )
MNFLGGSLRSGGGHRRDKGFSAKNKVQQYHGDGSESIILVGRPFRVLQKISDVPPPYMVGRQRSTKYGEGGSSYVYLVENTNHLPEFPRHLALKRSFFGVDQVTEAHKEVDIVSHIEDKNIVRVYHSEISRSEGRLGVSIAMEYCSNNLYRRIRSSAGTGPGTRLTEAEICHVMFAVTSAVGYLHAQQPPITHRDIRPENILINNKHAGPTAYKLTNFGNATTEAYQCETREEANMAIADIQMHTNPAFRAPEMADPWSKKRICEKTDMWAMGVLLYYMMYLCLPFDPSTTIGKENWVVTFPSQAMTSYTTSLRVMAEHLLDPDPCSRWDVFALTNYMRFDEDCSRHLGTFCFTKTEWPEGWEEQDVKVLGRAPPPKAPPVSYNEPGHEQLDSRGLSGQERVYGHVNRHQPPDDRGNGRDNAVVDSDAVQEAMIVLGGDPADDDPAVAECRHQIIMEQQEAWRRAKAAAGLRDSPPMEPQESSAAPAPTRANNGAERDVFDDLFASASPTVFPTSQAPPVMSPSAPPATHQPPEKDAFSASDLFSTSAPQLHPSYPMMSTYGQAPQQMAMGGWGSGAPVMGGGGYPMQQPQNQQQASWGYGVSNANNYAPPPPPPQQQQQPFTNFLAPVPGQQPSQQPETSQPPTARATAKRDPFADLFN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6BU_A_2(5IKW)
BMP2K_HUMAN
[Raw transfer]



3JW_A_4(4W9X)
BMP2K_HUMAN
[Raw transfer]



EDO_A_6(5LXC)
DYRK2_HUMAN
[Raw transfer]



EDO_A_4(4W9W)
BMP2K_HUMAN
[Raw transfer]
7 PsiBlast_PDB 78.0430% -11 - C1 -5I3O - BMP2K_HUMAN -
8 PsiBlast_PDB 77.6230% -13 - C1 -5I3R - BMP2K_HUMAN -
24 HHSearch 77.1031% -36 - C1 -5TE0 - AAK1_HUMAN -
6 PsiBlast_PDB 76.0730% -13 - C1 -4W9W 2.6 BMP2K_HUMAN
5 PsiBlast_PDB 76.0030% -12 - C1 -5IKW 7.5 BMP2K_HUMAN
4 PsiBlast_PDB 74.0830% -25 - C1 -4W9X 5.3 BMP2K_HUMAN
1 PsiBlast_PDB 73.7431% -7 - C1 -5TE0 - AAK1_HUMAN -
2 PsiBlast_PDB 72.5731% 7 - C1 -5L4Q - AAK1_HUMAN -
3 PsiBlast_PDB 72.0031% 1 - C1 -4WSQ - AAK1_HUMAN -
25 HHSearch 62.8320% -23 - C1 -1J1B - GSK3B_HUMAN -
16 PsiBlast_PDB 62.5025% -99 - C1 -3PWY - PDPK1_HUMAN -
48 Fugue 61.0319% -6 - C1 -1KOB - ? -
9 PsiBlast_PDB 60.9827% -9 - C1 -4C57 - GAK_HUMAN -
37 HHSearch 60.9721% 0 - C- -3EB0 - ? -
23 HHSearch 60.4224% -43 - C1 -1TKI - TITIN_HUMAN -
47 Fugue 59.6220% -20 - C1 -1TKI - TITIN_HUMAN -
35 HHSearch 59.1022% -2 - C1 -2X0G - DAPK1_HUMAN -
26 HHSearch 58.2423% -32 - C1 -3C0G - CSKP_HUMAN -
41 HHSearch 57.1922% -14 - C1 -1KOB - ? -
28 HHSearch 56.4523% -39 - C1 -3C0I - CSKP_HUMAN -