@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_15_1180: (2018-03-08 )
MDPAGRRLSGEQQQQQQPADRAKADADRGTVDMLPPLRTEASPFEQASAITNRSSAASAPLSVAVKVIPTLAAAMSSLRAGDDNDGGGENEGEEEPFLTNGSIALAEFTSLLKPAENNSILKEHIIHLLRDVDAEETLMRIARALEAQGTNETPVNVSATTCTGSSRDVASYTNASQSTVASMSTMQRRRSSAVSRRDATSLETLAGLSFLHSRRGATSPSAQESPSSAQPSEDVAPYNRSTRGLVGPLDTSFNSRSSLGTREEEQRQSKQQDDPLSAFMAASASQLSDATPTLRESPGLPTGSQCRGRRVAVSAAPCMAPPMIGEDSPATALPPLRVVPKTSAEEQQLRRLLRRCHSFSSLEADTLESVLKAMDKEVHAAGAAILEQGQATTEKLYLVGEGTCEAIKNGKSLGPLQPGGTFGELELMYKQAMCAATVRCVTRCVLYTLDEASYHRAVMTSALQKRRKFEKLTMSVPFLRCLPDFERMKIAEALETRVYQRGKTIIRFGSPGNYMHFIIEGEVKVVGRNSGRRVEVVRLRDGDVVGELEFLFNHLTVADVVATSREVRTACISREHFELIIGPIQDRLKEFVATSSTYEKYYVAEVADESVRTELNRIESSRKHRRVASRDQRTAIGGIDPHGEVLLSAPLPLLHGKCDTAGKAGGVSGVVANSDSAAGNGANAQGQRRAAARGSAELPKAMLRFPFAPITGKDVAVLALREDGLIMYWNSVLERLTSYSAGEAVGQNIYSFLLSEREQQCMYKAVNAARNYAGEAEAFLKRPSTKSIQFTLARSDGLTKTTVRLTIVPPVVSAGGNAAEVVLGFGEEVKEGPQKMLEQPQWLSGQIRAILADGTQTFEERLECIAETLNNFESTYRAMTVSTERLRVVNIRQMMGHILMDFGSECVSRGISVRQRFEGLPSERAYLDANLLPECLRYAMKLCLKYSDPGGSIITIMITVTEKNGLEFLVINFNLTGDGMPKAIAQFFDSPLKKHGDSVTTMSVDDDSGDGSGDDSDNDAEASMALRSTLQPRLRRKLRRVQRAVEDQGGTLRMLRNPQDSNIAFLIPFMPASEQDAENASIEESLSTLADSAGAGQLASLAGMSSGVGPPTSVAAAAAAFSVSLVNTPAGESSGLSNMSVAGTVATVSGQPNFSYTTCLAEDTPTHRIMLSSFLWERHHAVLTAFTFEDIVGLVGVADILIIDLQQSAITFLHERDPITRLREMLRHMAVIITSTNFDLVSSDTYAAAGFITLKKPCTPVQAMKAIRRAEEKSAVVKLERLRIEQTRETLARNSRGAWRHGALLGKGSSGEVYEAYDVLTGGKMAVKEMRLGNNDAKIEQFVQEISTMCNLQHPNIIHYFYCEESKEQKVIRVFMEFAGGGTLQSLLKTKGRLEYAELRALLRDVVEGLAYIHSQHYVHGDIKTANVLLSNDGKGKIGDFGTARTVNEGELLYVMQGSPLYMSPECMSAGEEDEDGNKIGYSFPSDIWSLGCVAMEMATNKPPFAHIKTIKGPAGLTTFITSLTDVPDLSPLFKCHPSIVEFVSACLNPDPSQRATAQDLLQMSLFSDSTHSDRNSAVMALKRAQLLHVLNKFVAFQEPEEAEKLEKRRNRLKVSRLASDFFSSRSSSSDNASEPMSTVFLNAAPAAEVEEATREKRRPGAAVTTAAAATAAVAAGNEDESDKDVTRRSGTVALAAGGASESPDGARPAGASAGAPLVNTVTSTDGSLNQAASTFTRYLRKWDFSTSSSSSSSQLSANSKAMTAAGGEGAHRDPVTGVAGGNDEAEPDARNPQTEGAYDLSPTPKKRSKTRSRPRATLTPPMRKPSHQRCCPDSTTTTTNSAEKDFFATSSDNSSSGRALNEADARSEAPAHQGGTARLTGTATTARNGPRPTGSEAVGYTPSFPGRRRNVRLDEAGNIVPFDRLSSMMSVAALLNNKGEQHGDDASAEGSPGVAAAAATEATAASRAPFPALGDANDHVLSPSSAAGLANASFTQPPGNYSFFGFNRNISFMGTNMDEVLNSAANDFLSNLAANWHTSNAACVETASSAGSMVQLPSRTFLRAEGSGSGRSHATLSSNREGECRTDRVVGVASPLAVTGQSEDRGDVPKTPSRRRGGAISRSPSARSPLEARGPGEPASIEGGNSGVQHGGTTLPLPQLPPPKPLSTGAAPTAASRSTHPVLSQLGSASYTSDDGTTSMTPRGDSVPLVGAAASSHRQRRARPPITNQSFFVVEDGSSAPLFSPHTGVTKSTGSMAGGPVSASRVSLATWSSVASADGSVTGGVAGETSSSTLLQQNYANVAVVAPAPVFPTFSTSSARAVWQQRRRHVAGGGRGGVGGGNMSNIHLTAPPSNEGSVYLMVADEQQGDGQRWRAAGASVSREGNDGDDDDLTSAAFGSMRSGFSRRSSAQSTSNLTAETLSATHEPVSERRPARSGDAAASASEGRRGAEVGDALPFSNLASEADSMVFTYLQRIDASLQDVLSQLQVRRRQCRRKSGGSITGVQDGFDHAPSSTPITTVQATPPQSATQLTTLQSSLSSALPSPASANSTSEVATTVTVSPQHHRSTGVSTSPAKLPRPLSSCTTPVTISQSRQGKPNPLSMRASPPLSKQCSNPRWPTEDEAEAEGDPVNHDATVWFDTPLSPSSSGHRASSGCDDVNVEVLLRKMLWRVSLLLDEVSSFSPRGPATASVARPP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



ADP_A_2(3A7J)
STK24_HUMAN
[Raw transfer]



3FE_A_3(4U8Z)
STK24_HUMAN
[Raw transfer]



3JB_A_2(4W8E)
STK24_HUMAN
[Raw transfer]



3JA_A_2(4W8D)
STK24_HUMAN
[Raw transfer]



ADP_B_4(4O27)
STK24_HUMAN
[Raw transfer]



ANP_A_4(4QML)
STK24_HUMAN
[Raw transfer]



STU_A_2(3CKX)
STK24_HUMAN
[Raw transfer]



ATP_A_3(3A7H)
STK24_HUMAN
[Raw transfer]



35R_A_2(4QMM)
STK24_HUMAN
[Raw transfer]



DKI_A_3(4QMP)
STK24_HUMAN
[Raw transfer]



34L_A_3(4QMO)
STK24_HUMAN
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



34U_A_2(4QMQ)
STK24_HUMAN
[Raw transfer]



J60_B_3(4NZW)
STK25_HUMAN
[Raw transfer]



J60_A_3(2XIK)
STK25_HUMAN
[Raw transfer]



8V7_A_3(5V24)
M3K5_HUMAN
[Raw transfer]



ADE_A_2(3A7I)
STK24_HUMAN
[Raw transfer]
32 HHSearch 66.8531% -59 - C1 -5J5T 6.6 M4K3_HUMAN
42 HHSearch 66.8031% -32 - C1 -3DAK - OXSR1_HUMAN -
1 PsiBlast_PDB 66.3035% -0 - C1 -2XIK 7.1 STK25_HUMAN
17 PsiBlast_PDB 62.9533% 2 - C1 -4QMN - STK24_HUMAN -
4 PsiBlast_PDB 62.7133% 3 - C1 -4U8Z 6.4 STK24_HUMAN
43 Fugue 62.7024% -50 - C1 -4DN5 4.6 M3K14_HUMAN
2 PsiBlast_PDB 62.4435% -20 - C1 -4NZW 4.5 STK25_HUMAN
6 PsiBlast_PDB 62.1133% 1 - C1 -3CKX 7.6 STK24_HUMAN
49 Fugue 62.1014% 20 - C1 -4IM0 - TBK1_HUMAN -
10 PsiBlast_PDB 61.9133% 2 - C1 -3A7F - STK24_HUMAN -
27 HHSearch 61.7728% -38 - C1 -2X4F - MYLK4_HUMAN -
5 PsiBlast_PDB 61.7133% 3 - C1 -4W8D 5.5 STK24_HUMAN
14 PsiBlast_PDB 61.5333% 4 - C1 -3A7J 6.9 STK24_HUMAN
15 PsiBlast_PDB 61.5033% 2 - C1 -4QML 5.8 STK24_HUMAN
7 PsiBlast_PDB 61.4933% 4 - C1 -4W8E 7.2 STK24_HUMAN
40 HHSearch 61.4524% -61 - C1 -2E9N - CHK1_HUMAN -
45 Fugue 61.2630% -63 - C2 -1RGS - ? -
20 PsiBlast_PDB 60.7933% 2 - C1 -4QMQ 8.4 STK24_HUMAN
18 PsiBlast_PDB 60.6933% 5 - C1 -4QMO 5.8 STK24_HUMAN
19 PsiBlast_PDB 60.5933% 1 - C1 -4QMP 6.6 STK24_HUMAN