@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_17_0070: (2018-03-09 )
MDFYALQDTLLRNAKSGGSSDTVDVESRYVLMEKIGSGSYGDVWSATRRTGTKDIYAVKRIDKRQAGTKGLRSVMGEVETMSLLSHPNIVKLEETYQDEACLSIVMEYLPGGSLQHRIDRQNVSELETRRFITQLLMAVEYIHEKGIVHRDLKPSNCLLSQNDLVVKISDFGLSVFAGNKQCLTTCCGTLHFMAPEILLEKNYGKPVDMWAMGVMAHVMFLGRYPFQARTEAALTKDICRGYRPREEGGGGLRCPPLLQDFISQLLLYDPLRRMSAKDALKHPWIKEGLDANRRTSLYPSQAPSATAMKPSARWRAAALAVMGVQRLLYLQKIQRLVRLGYDGFPILRDYRYLVTGKYVPASTSVECSHMFHARPMALLELISMIDTCPFLKHVDLSWNNIHSLSVIQALLKVVTRHPSLQSIDLSHNPIPAVAGRSIVRLIRNPLSQVTCINVGDTGISADTIGQINSFLKEKLTPAALSYSVSTGDMQSRLTQGSGDDTLMTSSSTTVSSLQQKRSICSGPPKQPAKKESRGVRLPPISRPPVARRHGKMP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



ADP_A_7(2RIO)
IRE1_YEAST
[Raw transfer]



ADP_A_6(2CN5)
CHK2_HUMAN
[Raw transfer]



ZZK_A_2(2WTD)
CHK2_HUMAN
[Raw transfer]



WTI_A_2(2WTI)
CHK2_HUMAN
[Raw transfer]



VGM_A_2(2WTC)
CHK2_HUMAN
[Raw transfer]



ANP_A_7(3LIJ)
?
[Raw transfer]



WTJ_A_2(2WTJ)
CHK2_HUMAN
[Raw transfer]



DBQ_A_4(2CN8)
CHK2_HUMAN
[Raw transfer]



LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]



A9T_A_2(4A9T)
CHK2_HUMAN
[Raw transfer]



STU_A_2(4MVF)
CDPK2_PLAFK
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]
37 HHSearch 79.4831% -46 - C1 -3KK8 - KCC2D_CAEEL -
2 PsiBlast_PDB 78.3534% -25 - C1 -3LIJ 3.8 ?
8 PsiBlast_PDB 77.7935% -43 - C1 -4FG8 - KCC1A_HUMAN -
9 PsiBlast_PDB 76.9535% -57 - C1 -4FG7 - KCC1A_HUMAN -
7 PsiBlast_PDB 76.8433% -26 - C1 -2JC6 - KCC1D_HUMAN -
36 HHSearch 75.5532% -10 - C1 -2PHK - PHKG1_RABIT -
1 PsiBlast_PDB 74.7835% -30 - C1 -2JAM 2.2 KCC1G_HUMAN
32 HHSearch 74.0832% -29 * C1 *3C0I - CSKP_HUMAN -
23 HHSearch 73.5230% -37 - C1 -2BDW - KCC2D_CAEEL -
4 PsiBlast_PDB 72.0233% -43 - C1 -1A06 - KCC1A_RAT -
33 HHSearch 71.4732% -20 - C1 -3C0G - CSKP_HUMAN -
10 PsiBlast_PDB 71.4433% -29 - C1 -2YCF - CHK2_HUMAN -
38 HHSearch 71.4231% -22 - C1 -1KOB - ? -
5 PsiBlast_PDB 70.5533% -35 - C1 -4FG9 - KCC1A_HUMAN -
11 PsiBlast_PDB 69.9633% -33 - C1 -2CN5 6.4 CHK2_HUMAN
6 PsiBlast_PDB 69.0233% - - C1 -4FGB - KCC1A_HUMAN -
28 HHSearch 68.6029% -50 - C1 -5IG1 - ? -
42 Fugue 68.1925% 31 - C1 -1KOB - ? -
3 PsiBlast_PDB 67.7631% -36 - C1 -4MVF 6.2 CDPK2_PLAFK
22 HHSearch 67.0034% 0 - C- -2WEL - KCC2D_HUMAN -