@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_18_0650: (2018-03-09 )
MDPSVMVGQYTLGKQIGSGNFSKVRLGTDPQGRTWAIKIVDKRRLKKENMEDQMLREVAIMRSLRQQNVVKLQEVLQSSNHYYLVLELVTGGELFDKIVAAKRFDEPTARRYFHQLIAGMYYCHSKGFAHRDLKPENLLLDANGTLKISDFGLSNLQQDVLLQTICGTPNYVAPEVLMERGYNGLSADIWSCGVVLYVMLAGRLPFEDRNMNVLLGKIERGDYQMIRHISDPAKDLVARMLTVDPRKRISMEDVINHPWFQIDWNPRLLST

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6PV_A_2(5K00)
MELK_HUMAN
[Raw transfer]



STU_A_4(4QFS)

[Raw transfer]



STU_A_4(4QFG)

[Raw transfer]



STU_A_4(4QFR)
?
[Raw transfer]



ANP_A_3(4LQS)
CBK1_YEAST
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



STU_A_4(4RER)
AAPK1_HUMAN
[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



STU_A_4(4REW)
AAPK1_HUMAN
[Raw transfer]



B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]



16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]



TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]



CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]



CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]



EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]



EDO_A_6(2X4F)
MYLK4_HUMAN
[Raw transfer]



CPS_C_16(4CZT)
CIPKN_ARATH
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
14 PsiBlast_PDB 89.0740% -58 - C1 -2YZA - AAPK2_HUMAN -
6 PsiBlast_PDB 84.7641% 0 - C- -5ISO - ? -
12 PsiBlast_PDB 83.9340% 0 - C- -4CFF - AAPK2_HUMAN -
11 PsiBlast_PDB 83.9340% 0 - C- -4CFE - AAPK2_HUMAN -
9 PsiBlast_PDB 83.9340% 0 - C- -5EZV - AAPK1_HUMAN (first) -
21 HHSearch 81.4043% -51 - C1 -5K00 11.7 MELK_HUMAN
5 PsiBlast_PDB 80.9343% -47 - C1 -3HYH - SNF1_YEAST -
2 PsiBlast_PDB 80.7450% -23 - C1 -4CZU 5.3 CIPKN_ARATH
39 HHSearch 80.5143% -50 - C1 -3HYH - SNF1_YEAST -
35 HHSearch 79.6842% -35 - C1 -4RED - AAPK1_HUMAN -
4 PsiBlast_PDB 79.6243% -52 - C1 -3DAE - SNF1_YEAST -
17 PsiBlast_PDB 79.4541% -22 - C1 -4RER 6.8 AAPK1_HUMAN
24 HHSearch 79.2234% -37 - C1 -4GV1 6.5 AKT1_HUMAN
36 HHSearch 78.9942% -37 - C1 -4RED - AAPK1_HUMAN -
26 HHSearch 78.9041% -32 - C1 -3AQV - AAPK2_HUMAN -
8 PsiBlast_PDB 78.6041% -37 - C1 -4RED - AAPK1_HUMAN -
16 PsiBlast_PDB 78.2840% -30 - C1 -4ZHX - AAPK2_HUMAN -
20 PsiBlast_PDB 77.2240% -19 - C1 -4QFS 6.8
15 PsiBlast_PDB 76.8440% -32 - C1 -3AQV 7.5 AAPK2_HUMAN
3 PsiBlast_PDB 76.5149% -19 - C1 -4D28 - CIPKO_ARATH -
19 PsiBlast_PDB 76.3640% -20 - C1 -4QFR 7.8 ?
1 PsiBlast_PDB 76.3250% -22 - C1 -4CZT 4.7 CIPKN_ARATH
18 PsiBlast_PDB 75.8940% -20 - C1 -4QFG 7.6
10 PsiBlast_PDB 74.4841% -21 - C1 -4REW 6.2 AAPK1_HUMAN
42 HHSearch 49.6731% -6 - C1 -2X4F 5.7 MYLK4_HUMAN