@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_19_0130: (2018-03-09 )
MQPSSDNGASTGANVVVEGKYTIQDANIVGRGAYSVVKVCTPIHPYVPPGSRPGMKYVVKIIEKEYLISLAKGDVDMAMAEIKREIDVLRHIPSHENVVTFLEYVETEKQFLLFFEKVQCGDLCELILQSSSGKLTEEKSKLYTYQIIKAVLHCHLHDIIHRDIKPENLLVSEDDNIKLTDFGLAKRSRGVCTGDSPRDPLDVTALMMPYPGCERLLGKRVVCSDVIGTPRYGAPEMFYAKFTQTHYDGFNADTWSIGVVTYITLSGSFPYSPGSNASEKEVFRTIMSTPLPKPSGISPLAWEFVQSMLNKDPSKRTPLYAALNHPWLADVVVQRGSVVAAQLRASVISADVESAAARFDEEARRLRICMAKLQSEVAALREERDRVREVQQPALQETHTQARRAQTPSGLSRPRSTRYPASTIRVSSPARVTNHRRTGSRDSSSAGSVPRRASAPRGRSPLARSAGGAAVRRGTPARAGGTTPARSATPSRTTGARSGSAARAMISTRGATPTRSATPGRSAHDRSRTPHRSAISGTSNGTTSGVSHSTNAVNPANELHLGDQVTYKGCRAIVRFNGSTAFGAGIWIGLEMLEGNEGTNDGSSFIDKKQYFTCPKGKGVFVRASQVKKLG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]



ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]



ADP_A_2(2W4K)
DAPK1_HUMAN
[Raw transfer]



ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]



GOL_A_4(5O2C)
WNK3_HUMAN
[Raw transfer]



ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]



MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]



1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]



CPS_C_16(4CZT)
CIPKN_ARATH
[Raw transfer]
41 HHSearch 81.7833% 0 - C- -2WEL - KCC2D_HUMAN -
4 PsiBlast_PDB 80.5429% -40 - C1 -2YAB - DAPK2_MOUSE -
39 HHSearch 80.3933% -56 * C1 *2X0G - DAPK1_HUMAN -
2 PsiBlast_PDB 79.0929% -39 - C1 -2YA9 - DAPK2_MOUSE -
15 PsiBlast_PDB 78.7630% -39 - C1 -1WMK - DAPK2_HUMAN -
3 PsiBlast_PDB 78.6129% -40 - C1 -2YAA 4.5 DAPK2_MOUSE
20 PsiBlast_PDB 78.5530% -36 - C1 -2A2A - DAPK2_HUMAN -
42 HHSearch 78.3930%-106 - C- -3FE3 - MARK3_HUMAN -
5 PsiBlast_PDB 78.2130% -40 - C1 -2A27 - DAPK2_HUMAN -
16 PsiBlast_PDB 78.1630% -41 - C1 -1Z9X - DAPK2_HUMAN -
30 HHSearch 76.3231%-129 - C1 -5K00 - MELK_HUMAN -
25 HHSearch 75.1234% -85 - C1 -2X4F - MYLK4_HUMAN -
6 PsiBlast_PDB 74.7727%-109 - C1 -4CZU - CIPKN_ARATH -
32 HHSearch 74.2727% -88 - C1 -2Y7J - PHKG2_HUMAN -
13 PsiBlast_PDB 73.9629% -59 - C1 -4TL0 - DAPK1_HUMAN -
12 PsiBlast_PDB 73.6529% -57 - C1 -2X0G - DAPK1_HUMAN -
11 PsiBlast_PDB 73.4529% -56 - C1 -2Y0A 3.0 DAPK1_HUMAN
36 HHSearch 73.3927% -86 - C1 -2Y7J - PHKG2_HUMAN -
19 PsiBlast_PDB 73.1927%-107 - C1 -4CZT 2.6 CIPKN_ARATH
10 PsiBlast_PDB 72.9728% -52 - C1 -3MFU 3.8 CSKP_HUMAN