@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_19_0360: (2018-03-09 )
MPSSNLVTDAYHNTELAINVFFSIHTDANPVMGRKATKASVVPIAASLLPANAAVMIDDDLTPGVADFGATTEPAVRSPSSVEREVFENSIADIGGGGALSQSVVSRRDMSLADISRMRLEGCRARHTLFAATTSLRGSMASSLRSTSGSPMLPLTGRVRDHAGICGETTSAAISAVSQAPAWSSLNGLGRSFNRRSSMLSVRTNALDTSIAILQHMAHDTAARAEAACNAQSLAGTPSTATSACGSVALPSLQPTQPYPEDTHAGARGYKVVGSGNTASVEDSCSGSGQHTPVLHTVHTRQFTSASDSSSPLNSLSESELCSGHLRAGGRSHLSAQASATHLTGSGGVAKAASDLQHSSPRSHPDGSPLAARRQTIATADHRAPHHSVAVAATEVALPSAQNQTTDVSVYNHDFQHIVPLEVKEALQRNMRPICEDDDDDDDDALLHDGLSAPTPPPLTSFANVTHSMYEDTCHLDTPSNYVRTRGTGSVGGAGTEIADAPFSFPPSTLHAPSRLFASPNAPALQTATSSMIAWQTGGTGGAKSIRPFDSDTAETLAAGLSISGTGVPFQAWKFPSLGKPNSASSLRKTSLGENGNAEALPEGAVGGAAAVHQPTVPLSEHCSHPTRETLMPGSPQRQCSESPPLTRNGLQATSKHITLKTAATPCSSVAVGALSGSGDVGPRAASLLSGVDGTHRTSSVVHGTPMRTNDGAGGRFVQPAVAQGSPSSAAGSLSAAADSSNTRKLEMMYTVYERLLHARPPDNSFPEATPRSLQTLTSRSLTEEVTPPLDTSPSPPAAQQAPQSGAAGAGFEAMSQGDCSPSMSYSGALSRSAGYYSFGKRISLSHPNKQTLPHQFLGSAANLHAMSSPPRVAMIGTPAVADMIVASNGNSSGSAMAFSSTARARRRTLDLSVLQRIDSRPLLQSTLFLQNNLHSICEAQARFARKERAEDAGSAEQRNAISLSPSKAAVSVAVKPVPQYTVPLEEQSAAGVPSPASVADVETCEGVEGVSQGRMTGRTAIAETASPVVLGSAAASATAASTARELNQTRSSCRGTQVPSVDSVLPSSVSPSIGKRSNASSLPVNCIQEGQGRQEEPLRKQAEMHVNPTAAAAVSVAHESNGISPHRYYRALTEAKCLVRHVHGVDGVEREVDNDSMDLVVYAGMHLMGWLEVVSLLGCGSFGQVFLCKDLRICDGHFVHPSEIEGEDYEYWNCSHAYLPFSSVDAVPTHRPLVAVKVVKSVPLLEQQSVLEAEMLVLIGAQTALPPANAAEEARESAIPAFAAATGGRIGVNEPPPADPRCANIAKVLADGICYGHHCIVMERYGANLYEYIAANDHRGLPMYQIRSIGAQLFSALSLVHEECHIIHADIKPENVLLTLDSGRGTLRVTDEPSPITAATAAATPPAEAMSNSNASTTAVATKTPRSVPQQNAFAEAAHRSPSSTSPNAEPPWHQQRTESAASSSASPSLPAERSHTARVGPGAVARQRLGFKGKRRNSNTLLDLSSSPMTLATYKGHSLCHLRSSSASRATIVEQTDMPTPEPRRMHMLSQSSALVTSAASGMSLQSLGGGGAGSYSRHMMQAPAAPVEEAPAVPVAPAASHLHVRLIDFSSSCYDGGPFYQYIQSRYYRAPEVIIGAPYNSAIDVWSTGCLLAELLLGMPLLPGCNDHHQLSLVEEMIEPLPDYLVEDGDNADLFYIVAAPGGEGSTDAALPRAPAAAAPGATASATLQQPRSFALRTRENYLEVTGSEPLQYRRYFTYQTLQELVRHCPLTLEERRMSNGLHPYVSANESSAIPPDATPSLSVRSDMMKQRYLLFDLLRRLLQTDSKLRPTAAQALQHPFFSSLPPYFKTFALD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(3LLT)
?
[Raw transfer]



DBQ_A_2(1Z57)
CLK1_HUMAN
[Raw transfer]



6FB_A_9(5J1W)
CLK1_HUMAN
[Raw transfer]



EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]



EDO_A_6(2WEL)
KCC2D_HUMAN
[Raw transfer]
51 Fugue 73.5917% - - C1 -3H4J - SNF1_SCHPO -
25 HHSearch 72.8930%-156 - C1 -4YU2 - DYR1A_HUMAN -
23 HHSearch 72.0033% 0 - C- -5MY8 - ? -
24 HHSearch 68.6130%-156 - C1 -4YLL - DYR1A_HUMAN -
32 HHSearch 68.2130%-175 - C1 -1Z57 4.5 CLK1_HUMAN
31 HHSearch 67.0730%-164 * C1 *2EU9 - -
27 HHSearch 66.6231%-169 - C1 -3LLT 7.1 ?
21 HHSearch 66.0430%-156 - C1 -4AZF - DYRK2_HUMAN -
22 HHSearch 65.1629%-144 - C1 -5LXC - DYRK2_HUMAN -
30 HHSearch 65.1430%-168 - C1 -5J1W 4.3 CLK1_HUMAN
33 HHSearch 53.2126% -79 - C1 -1J1B - GSK3B_HUMAN -
53 Fugue 52.5415% -9 - C1 -5KCV - AKT1_HUMAN -
17 PsiBlast_PDB 52.3641%-121 - C2 -3ANR - DYR1A_HUMAN -
2 PsiBlast_PDB 52.1456%-135 - C2 -3K2L - DYRK2_HUMAN -
26 HHSearch 51.9024%-129 - C1 -1TKI - TITIN_HUMAN -
8 PsiBlast_PDB 51.2141%-124 - C2 -5AIK - DYR1A_HUMAN -
48 Fugue 51.2011% -15 - C1 -1TKI - TITIN_HUMAN -
20 PsiBlast_PDB 51.0541%-133 * C2 *5A4E - DYR1A_HUMAN -
19 PsiBlast_PDB 50.5941%-125 - C2 -5A3X - DYR1A_HUMAN -
1 PsiBlast_PDB 50.4356%-141 - C2 -4AZF - DYRK2_HUMAN -