@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_19_1510: (2018-03-09 )
MGSQSGKASLSTSNRRRAVCDLCGTKATRKSSLQTGSTLVLKQCSRCHLRCCGECYVWRRYGSSFSTCYDEEHAVAEFAPVCRRCVAGPNLVANAPRFVWNKIFEYCDATAKHHLLQLCHATQMGVVLPYPHTRYGWSTFFEGRHFISKGANGEVYHTVVRRDITKELARSLIDALDAKVLADLSGRAVAVKAIRKSTVFSLRRWKHIQREVDTLRRCCHRHVVQLHFVAQGPSEVYIVLQYVAGGDLFDWLVRQQIPMEYDVVVIARQLLETLHFMHEVCGVVHRDIKPENILLQPVANPDVQRQGDGSLGADDGRSTEHTNSSDDLYIRLADFGYAKLLPQNEAGDATLSPAQISRPPLPPVPADAIGIVGPRAENVQRTEPRAKACKPLLISSTPCGTLGFAAPEILSAYNARKNALQRPRSNRQSAEQLGDAAKPRTPVDLVKRMDIFAAGVTICILLTGCEPFPCRSSKEHIEAVHEGLDFSGPQWNYVSQPAKNLLRRMLAPRAADRPSAFECLNSSWMKHQGPYTDATSEVEDDDENARGKGLNRSASVWQLLSTSFQNSVHSLRKNEGWLFVQDAQGLVTTIPRQLVNGREDSESFSEALHSPNSCEQASTVY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]



ATP_B_2(1QL6)
PHKG1_RABIT
[Raw transfer]



AN2_A_5(5JZJ)
DCLK1_HUMAN
[Raw transfer]



STU_A_4(4RER)
AAPK1_HUMAN
[Raw transfer]



B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]



GUI_A_3(5JZN)
DCLK1_HUMAN
[Raw transfer]
39 HHSearch 79.8531%-123 - C1 -5IG1 - ? -
37 HHSearch 77.7732%-116 - C1 -2BDW - KCC2D_CAEEL -
40 HHSearch 77.3531%-116 - C1 -5IG1 - ? -
25 HHSearch 73.5432% -34 - C1 -2Y7J 5.8 PHKG2_HUMAN
22 HHSearch 73.0231% 0 - C- -2WEL - KCC2D_HUMAN -
29 HHSearch 72.7532% -41 - C1 -2Y7J - PHKG2_HUMAN -
49 Fugue 69.7019% 26 - C1 -2ACX - GRK6_HUMAN -
31 HHSearch 68.6625%-112 - C1 -4WOT - ROCK2_HUMAN -
38 HHSearch 67.8728% -49 - C1 -1KOB - ? -
36 HHSearch 67.7827%-125 - C1 -4XBR - INKA1_HUMAN (first) -
42 Fugue 66.1323% -28 - C1 -1KOB - ? -
35 HHSearch 65.3128% -23 * C1 *2X0G - DAPK1_HUMAN -
41 HHSearch 65.2325%-106 - C1 -3V8S - ROCK1_HUMAN -
34 HHSearch 64.0531% -51 - C1 -4NIF - KS6A1_HUMAN -
30 HHSearch 63.7123% -93 - C1 -4LQS - CBK1_YEAST -
23 HHSearch 63.6626% -49 - C1 -2X4F - MYLK4_HUMAN -
47 Fugue 63.5124% -13 - C1 -4AW2 - MRCKA_RAT -
28 HHSearch 62.5929% -44 - C1 -3C0I - CSKP_HUMAN -
43 Fugue 61.7819% -32 - C1 -1TKI - TITIN_HUMAN -
33 HHSearch 61.7623% -92 - C1 -4LQQ - CBK1_YEAST -