@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_20_1370: (2018-03-09 )
MSTASQHRKSDSAERDEVNVKNAPKVASEAEINRRNVVFAEALRCACIAMRVGDDPGYIWTPQRLGAGSFGTVTLAYRHEGDAVWRKTAVKRISLRKEMRLSAVLEKVRCAGREVALCRRAGVSPHVVPMYEPWFDCREGVIALPMDAGDFSLEQYAVHCGFRFPPLVLLSMCAQCARAVAHLHRRGVVHRDVKPDNFVVNVFDTAGGAGAGGDGGRRDARAPLVRILDFGLACGVEEVGQELKRCVGTPHYMAPETFSHLCDCDVPAACDVWSLGVTLFRLATGVFPVFEMDKTWQQPPFTALHSGKLWLPSRNLFHEPLSAESLAVLSVAASMLVLDPRYRPTADAAVLQLQGFQEAFSHQIQSWPPGSGPQPCRVWKRTRK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



TRS_A_4(2F57)
PAK5_HUMAN
[Raw transfer]



EDO_A_4(2J0I)

[Raw transfer]



GOL_A_3(4APP)

[Raw transfer]



GOL_A_2(2X4Z)

[Raw transfer]



EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]
49 Fugue 72.3320% -83 - C1 -1KOB - ? -
25 HHSearch 68.9726% -88 - C1 -3C0I - CSKP_HUMAN -
24 HHSearch 66.3726% -91 - C1 -3C0G - CSKP_HUMAN -
51 Fugue 66.1119%-102 - C1 -1TKI - TITIN_HUMAN -
4 PsiBlast_PDB 65.3925%-119 - C1 -3HZT - ? -
19 PsiBlast_PDB 64.4727% -33 - C1 -4FII - PAK4_HUMAN -
40 HHSearch 64.1628% -67 * C1 *4XBR - INKA1_HUMAN (first) -
54 Fugue 63.6927% - - C1 -3H4J - SNF1_SCHPO -
14 PsiBlast_PDB 63.4427% -62 - C1 -4NJD - -
20 PsiBlast_PDB 63.4127% - - C1 -4FIJ - PAK4_HUMAN -
13 PsiBlast_PDB 63.2627% -58 - C1 -4APP 3.5
1 PsiBlast_PDB 63.0827% -27 - C1 -2F57 3.9 PAK5_HUMAN
3 PsiBlast_PDB 62.3227% -30 - C1 -4XBR - INKA1_HUMAN (first) -
5 PsiBlast_PDB 61.7127% -34 - C1 -4FIE - PAK4_HUMAN -
36 HHSearch 61.3425% -70 - C1 -2WEL 2.4 KCC2D_HUMAN
17 PsiBlast_PDB 61.2827% -33 - C1 -4FIG - ? -
18 PsiBlast_PDB 60.0527% - - C- -4FIH - PAK4_HUMAN -
10 PsiBlast_PDB 59.9027% -61 - C1 -2CDZ - -
9 PsiBlast_PDB 59.3927% -55 - C1 -5BMS - -
16 PsiBlast_PDB 59.2227% -33 - C1 -4FIF - PAK4_HUMAN -