@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_21_1000: (2018-03-09 )
MMNDLPRWPRYRPIRVIGQGGFGTVYLCVDTEPTSTMYEQEVAVKAVSLGALSDEEVLMVMSEVSLLKNVGHPNIITYYDSFLYDDDESALSRKGGATLVPQADGDDIAAAGAGFRSQWLCLVTEYMDGGDLAALLRQYSGQELNSTKDVCEATSLSTVGTAAAARKRGRPSAAVTEDAAAGADQGEVSEGDWVSRSRLHRQRLATTLRAVPRPPMSTFPTTVTKATVMRWDGLDASVDQTWMSDASAAAMPTTPLGATDAEAADGAACGSRNGIQMPTAAASNAAVGSAATGAPHLTNVSVKNTVAAAGLASEPLEPQLPPPPNQLWVESFLITDIAKQCLDALAYLHALCIVHRDIKPSNIYLSKRDGTVKIGDFGVSKLLQPAEPFTMTFVGTPFYLCPELCMGDPYSFGADIWALGVVLYELYCLKLPFTSDNVLAQIYVITEGVYDTAALGTPHAFAESQQAVLETLYGPSFLHSERLLHSLVVSMVDKMLQVDPAERPSAEELLTGVFGAGSTSRCGSSAGLPLAPVAPTPVHRPLSTCALAHDSVSTPPQRGPSSFAVKPEGVAATTPQAPSNRLGPSASEQHARWAGSLVAAASSTLQQEQGASRVSLTAPGSRRSRERRDDVVDDFTGAHAPLAVRVKTSVGDILQGMPSAQRERLGNRAAAEERDEKEEVSRAMLPVASPKPTPSSALFHSTVKAGVGSDSANRQAALSPSLAGRERAEVAALPEKRRGSTVGAEPPSLELAEHTALQLLPAAPFPLELLYGGLVNIGDSAVNSTGATGEQRTVDDKASVSTPLGAQATQQASPLSSMLPADRPPAVRTHCDDDDALDHPIGAQTRSEFMALMENIPWLKNAEVFSSIPLSAGCDNVMLVERANRSSVSASGADGALSSATDNTAAGGSEERAEGAAPASKGSRTAPHQRQSQLPSPLRSPHSPATGTEDMQMSSNPLLPVCRAGVVSPTAPRIEVKTISGTTITMGGSRRPPSSRSPFQRGSAGAAEMADAESTQSVSQRRVSGGLTAASRQPPCIPAAPLRQRVSVTALPTTVLTSTPKPPASRPDEPQMTQDASGPACPSPSLQPRGDADRQPTAVTVASKGASASHPRLFSSSGLEPTVGNAASEARLRPFSAAQMRATAIASASGAAPPTPKAHSPGHCEGYSTTELEALLQAKLLTHYQRRQRQLGAQRTQHAAQEAAKAAARAKLKALYDEVFVSRLDPASSDAAYTAPYHSGGTIDGPSEVPDEFVARTDKRSRAASDSGDSGAHFPGDDAVAAPVARAATQLPALEADAWAKGAPVAVHLTKEAASPSPPSAPSPPSAPSPPSAPSPPSAPSSHGSPLPFSVDATARQAETEESVLRALSAVYSRPVEIPATTVPGTGTLMDDGDYGKDWLAATPAVRRIREAASLAVAVEHQCAAFRRGKEPARLCVAPPWRPPHDSRDVPGLWETSSAEEEADVSARGRLGCPAPASVREEVRWRWSAPPSDLDDTAGTTSEDEERGALLSSTASSSAVPSISTSPSSSSSALLASTSGANMLDAPGQTSKTPSITAAPEADVQQRLQSRKLVPSGGELGGGVIGSRRSPADAHAGGPRPSSLLGSPMYLELDSVDGGIRGGHTRDDGIHGVSLSMSSLADASAKATAAAGHEKDETDSASASSSSTTSTISSTSSASHSSASHSSRALSHPHRSKDEARHDVSSSSHDDGSSAQNSSSGSSSDDAPSSASQTASFSFHSFGGAASSTDANDDDAEPCAATKRADSDGDEDMSYTYTVQLDAVTGRRHFEYVCPVTVEVVGALPGGCRVVSAVAALRALDFAKAAPLSAMQVPPSEHCSMKQGSDGLAARVLTAEAPTDLSATPSPHEGGDDTAAANGGISSCPGQDKTFLFDGEYHTMWQEDGGFGAAAASPPTPSAPAPSSSLSSLPPDAGATVGFTAVPGKQQGHVPAANGMAPPEGSQSAREATLHSALPSTTNWQPDATARVAAASSSCVEDGNNDGNGATAHLRGRAASLHLSGETLARVAAPLRPSHVALGALSEETMAKAHAPLTHPSLADSDPTKVNTEMLPASKSASSNADGNQAMGFLCDRACTQGQTAVTPAQEIAAVMETTWWMRVPSSPSASSQGLGTSQQQHQLTGSPQYIHLPLSLALRPLRQRTRFVGLLWRLWVSLKVSEPALSRVLLHRRGGAPSPSPGCTFAEAFGDWVTGTTPARDTDTGECTEVDVSQQSSSETSTSLRLGRTITTTATTEASSNSDTAADSQVLPASGSLTAPSRPSPLKWGLYYVEARTWCAVQLRTDADWAVVRRKISEMGTMLPFVRLYLLLEEAEPASE

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_D_4(1J1B)
GSK3B_HUMAN
[Raw transfer]



3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]



GOL_A_5(5O2C)
WNK3_HUMAN
[Raw transfer]



GOL_A_3(5O2C)
WNK3_HUMAN
[Raw transfer]



ANP_A_2(5DZC)
?
[Raw transfer]



4ZS_A_2(5EZR)
?
[Raw transfer]



499_B_5(4Y85)
M3K8_HUMAN
[Raw transfer]



3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]



1TR_A_2(5FET)
?
[Raw transfer]



1E8_A_2(4RZ7)
?
[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



6DA_B_4(5IU2)
M3K8_HUMAN
[Raw transfer]



1FB_A_2(5F0A)
?
[Raw transfer]



4PV_A_3(4ZLO)
PAK1_HUMAN
[Raw transfer]
49 Fugue 75.0114% - - C1 -3QA8 - ? -
42 HHSearch 68.4030% -91 - C1 -3KK8 - KCC2D_CAEEL -
36 HHSearch 66.7630% -88 - C1 -2BDW - KCC2D_CAEEL -
27 HHSearch 65.2429%-139 - C1 -4XBR - INKA1_HUMAN (first) -
31 HHSearch 64.8434% -29 - C1 -2Y7J - PHKG2_HUMAN -
30 HHSearch 62.7234% -32 - C1 -2Y7J - PHKG2_HUMAN -
35 HHSearch 62.5131% -48 - C1 -4GV1 5.1 AKT1_HUMAN
32 HHSearch 61.3830% -68 - C1 -5O2C 2.2 WNK3_HUMAN
26 HHSearch 60.3428% -55 - C1 -3C0I 5.3 CSKP_HUMAN
29 HHSearch 60.0228% -52 - C1 -3C0G 4.8 CSKP_HUMAN
21 HHSearch 59.9829% 0 - C- -2WEL - KCC2D_HUMAN -
25 HHSearch 59.6827%-101 * C1 *1TKI - TITIN_HUMAN -
28 HHSearch 59.6029% -89 - C1 -5J5T - M4K3_HUMAN -
23 HHSearch 57.1428%-100 - C1 -2X4F - MYLK4_HUMAN -
39 HHSearch 52.4226% -27 - C1 -2X0G - DAPK1_HUMAN -
12 PsiBlast_PDB 48.5731%-157 - C1 -1YHW - PAK1_HUMAN -
16 PsiBlast_PDB 47.3530%-171 - C1 -4ZLO 3.2 PAK1_HUMAN
14 PsiBlast_PDB 46.8430%-156 - C1 -4ZY5 - PAK1_HUMAN -
41 HHSearch 46.8025% -90 - C1 -4JXF - PLK4_HUMAN -
3 PsiBlast_PDB 46.7931%-156 - C1 -4ZJI - PAK1_HUMAN -
6 PsiBlast_PDB 31.0843%-186 - C1 -5DZC 3.0 ?
8 PsiBlast_PDB 31.0643%-182 - C1 -5F0A 3.5 ?
9 PsiBlast_PDB 28.2343%-180 - C1 -5FET 2.6 ?