@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_24_0220: (2018-03-10 )
MEGASDKLLREPFRANFKRERSSSYSTERGSPTSPHLRRLRPLPTSSSEGKGAADGDGEEDPHTRRQAEPELFELTPHGGTANTNVRATRFGVEGLRIGRDPSCCDLVLPSNSVSRLHCVLSVLGDDVFVHDNSFNGTFINGRRVGRGRCSVLHPRDTLSFLNPTLEEASRCGFEFAPLPGHSSSAFTAVEGLRRYELGPVLGQGSLAAVRLGIDRETGAPVAIKLIERGRFSCEEAAASLHTEIEMMRSMDHPHVVRVVDAFEGSGCVALVMEYVRGGDLFDYIVGRGRNPFTEAEARHLFGQLLEAILYIHGRSIIHCDLKPENVLVDVVRRGSDGEVDTTSASATATTQGVASSALQTDGDAALSVVDDHQAEAKTVSPYDVRLKLADFGSAKYEGGGAGGGMLETTGAATPVYAAPELACFPADGAPPHEITAVVDVWSLGVLLYILCSGTVPKPPRADAVVAFNRSMTHLSVLCKDLIARMMTVDPSQRPSLADVCHHPWLDGLTISGAPDRGALGSKDVLSVTAKLSPSFPEAAKPL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6Z5_A_3(5KZ8)
MARK2_HUMAN
[Raw transfer]



ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]



ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]



24R_A_3(5EAK)
MARK2_HUMAN
[Raw transfer]



6Z2_A_3(5KZ7)
MARK2_HUMAN
[Raw transfer]



GOL_A_6(4GV1)
AKT1_HUMAN
[Raw transfer]



5RC_A_2(5ES1)
MARK4_HUMAN
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



STU_A_2(4MVF)
CDPK2_PLAFK
[Raw transfer]



16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]



1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]



CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]



CPS_C_16(4CZT)
CIPKN_ARATH
[Raw transfer]
21 HHSearch 75.9329% -33 - C1 -3I6U - CHK2_HUMAN -
33 HHSearch 70.0129%-103 - C1 -1KOB - ? -
47 Fugue 69.2723% -69 - C1 -1KOB - ? -
45 HHSearch 67.7232%-114 - C1 -2BDW - KCC2D_CAEEL -
31 HHSearch 66.5933% 0 - C- -2WEL - KCC2D_HUMAN -
23 HHSearch 65.3530%-104 - C1 -2X4F 6.3 MYLK4_HUMAN
10 PsiBlast_PDB 65.0229% -94 - C- -3FE3 - MARK3_HUMAN -
6 PsiBlast_PDB 64.9629% -98 - C1 -2QNJ - MARK3_HUMAN -
52 Fugue 64.1921% -9 - C1 -2ACX - GRK6_HUMAN -
12 PsiBlast_PDB 63.8928% -76 - C1 -3I6W - CHK2_HUMAN -
18 PsiBlast_PDB 63.8630% -54 - C1 -3MFU 4.4 CSKP_HUMAN
39 HHSearch 63.5232% -23 - C1 -2Y7J - PHKG2_HUMAN -
36 HHSearch 63.4832% -21 * C1 *2Y7J - PHKG2_HUMAN -
16 PsiBlast_PDB 63.0830% -49 - C1 -3MFS 4.6 CSKP_HUMAN
8 PsiBlast_PDB 62.3328%-114 - C1 -1ZMV - MARK2_RAT -
30 HHSearch 62.3033% -43 - C1 -3C0I - CSKP_HUMAN -
15 PsiBlast_PDB 62.2930% -50 - C1 -3MFR - CSKP_HUMAN -
3 PsiBlast_PDB 62.1329%-104 - C1 -5KZ8 7.6 MARK2_HUMAN
42 HHSearch 61.6031% -17 - C1 -4B4L 2.4 DAPK1_HUMAN
14 PsiBlast_PDB 61.4028% -37 - C1 -3I6U - CHK2_HUMAN -