@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_24_1800: (2018-03-10 )
MGCSTSTHASPEADEDAPLKRSVYSASRTSDQVVSGRQNSNKDQTNDACTAVSENPSRTRSSSDTEGRAHGRGIGAIHYPNQLGKDECDGGEDEVVVIPPSADKSTRTRFTFPQRTLLNVGSHTQAGDSGERKRNSITASPSSFTAMQRRLSDGSHGHSSFTTMSPAPPDAKETPLQLTQTRALPTAATIPTACLSISPPQRLSIPANSFAGSSASASGAVALPSQEQHQIETPHVNDGGFSIEWDEEDNTPRGRGIPDSTTTESGPCSVTRGMMAPSGSFGIGVGGGWRSKSPKWIDLSRKRSQSTVSLLSLADTPNNPHVLSSGSDFGRDILGGSHVFGGLATGGGSSRPQSGYAMGRDMCVERFDQQRHSNGLAVFCNQPRECALCRNATAAFACEVCDDFFLCENCRFDLEAVCAVHDPTHAILYMQDNHYNSSRTFGGDSIFSLSGDGGVSSLFYNPCFKCKRVIDDVEPVYRCDQCDYIVCQECFIQHEEPGNAMERASSLSAAMAATREEQASCKPLPIESAALVLASGPMPPHEHELKRFQRKSRSNSVHEGAVVTKTRNSGGNKVINDYVVVRQIGHGSYAKVKLVQHVHTQELFALKILRRQKKAAMSGITLGRSRVKSAMAGISEDDLLREIAVMKFIGHPNVVKLKEVIEDVDSQKVYIIMEYCEKGPVHVLGDPALPLEQVRQYGADILRGLLHLHSEFLYHRDIKPANCLVNRDSVVKIADFGTCNSQIRTKLAEGTPAFSCPEQVRGEEVSGEVVDSWAFALTVYEMACGTLPVSTTSFVQHRSLLMSKSPVPIPKIGDEPLCDLLAQMLEKDLSKRLLLPAATRHPFFAECHVDVHGAVPGTAPRSIFAVLATSGGSAAAQPQQQQLPSLAELYDKALESVHRGKNLKDCFHGVRALRRVRRKEVETARHSGTGDQVGGGSAGAEKSSAYVMNSRDVYGGSDGSGSDGEDEEGAGRLWVGGRAGHKEEAAAAAAVEEAVEHHLFTQEPKLELAQVTLTAPATLEKLNRLHQVTAEMRLSHNALVRLAPLRLSTFSMLMDIAVTFNRLEAIPQEVLAAPRLVRLDLSHNRIDSIPGSLVTKALFLERLSLHHNLITSVGTTTITVVEPSPVTFRVPTSATATCMGSNMVAVPDASVVSSSITQTSLPGRGGSSRSKVVSVLAAPCLRHVRLSGNPLERLPDALETTHKLQLVLDAIPALMEQWDTHMQADSKPTTSTAAAATGGQSRLPAVIVWDDSFPVRIPSVEPAVWLAVNNVAIYRVQTLRLCQTRRVVLCQCADPRFPNGLFLSEELEVYFAALSKALQDCREQRQQLAVEAPFSLSAPAEAIPSEALPPIVGKAARNYVESYFFVTDDENEEEGGYHSLVSYLYDSLSANIPVLVVVVSSGTSCAVRTNIVAAISTCLTRLRGGDPEQLDAEQAELIVSTMRSLYA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(4GV1)
AKT1_HUMAN
[Raw transfer]



ANP_A_2(4BFM)
MELK_MOUSE
[Raw transfer]



8R7_A_2(5UYJ)
KKCC2_HUMAN
[Raw transfer]



8R4_A_2(5UY6)
KKCC2_HUMAN
[Raw transfer]



24R_A_3(5EAK)
MARK2_HUMAN
[Raw transfer]



6Z5_A_3(5KZ8)
MARK2_HUMAN
[Raw transfer]



609_A_2(2ZV2)
KKCC2_HUMAN
[Raw transfer]



OT5_A_2(4CQG)
MELK_MOUSE
[Raw transfer]



6Z2_A_3(5KZ7)
MARK2_HUMAN
[Raw transfer]



5RC_A_2(5ES1)
MARK4_HUMAN
[Raw transfer]



9JS_A_2(5VT1)
KKCC2_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
51 Fugue 79.7716% - - C1 -3QA8 - ? -
20 PsiBlast_PDB 79.2428% -61 - C1 -4CQG 8.3 MELK_MOUSE
19 PsiBlast_PDB 79.0628% -59 - C1 -4BFM 6.5 MELK_MOUSE
4 PsiBlast_PDB 75.6732% -44 - C1 -2ZV2 7.3 KKCC2_HUMAN
25 HHSearch 74.8728% -52 - C1 -5K00 - MELK_HUMAN -
2 PsiBlast_PDB 71.6933% -16 - C1 -5UYJ 7.9 KKCC2_HUMAN
1 PsiBlast_PDB 69.6733% -12 - C1 -5UY6 8.6 KKCC2_HUMAN
42 HHSearch 69.2226% -54 - C1 -3C0I - CSKP_HUMAN -
43 HHSearch 69.2126% -55 - C1 -3C0G - CSKP_HUMAN -
14 PsiBlast_PDB 68.6127% -3 - C1 -4YOM - ? -
48 HHSearch 66.8029% -50 - C1 -4WOT - ROCK2_HUMAN -
3 PsiBlast_PDB 65.8833% -12 - C1 -5VT1 3.1 KKCC2_HUMAN
17 PsiBlast_PDB 64.8431% -49 - C- -3FE3 - MARK3_HUMAN -
33 HHSearch 64.6025% -54 - C1 -1J1B - GSK3B_HUMAN -
26 HHSearch 63.6029% -14 - C1 -4GV1 Error AKT1_HUMAN
45 HHSearch 63.4627% 0 - C- -1FOT - KAPA_YEAST -
11 PsiBlast_PDB 62.7931% -36 - C1 -3IEC - MARK2_HUMAN -
30 HHSearch 62.4824% -32 * C1 *2Y7J - PHKG2_HUMAN -
28 HHSearch 60.2526% -64 - C1 -4JXF - PLK4_HUMAN -
32 HHSearch 59.8024% -31 - C1 -2Y7J - PHKG2_HUMAN -
10 PsiBlast_PDB 59.4131% -39 - C1 -5KZ8 8.1 MARK2_HUMAN
18 PsiBlast_PDB 57.3230% -49 - C1 -5ES1 9.0 MARK4_HUMAN