@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_24_2090: (2018-03-10 )
MTSTSVALIASVLRQPRVGDDLQWVRYDAPFRTAQDYAAAEYLYRLRLCSLRLRSSLLSPSLPRTGPVSEVAHLLPHYPVQITAQLVYMDEPLSPVVESAAVYASAAALLPPASPVGGDTDTHAEMEVVYTFTDEWLVFPLELCDVPLDASCKLHLWHRDTHVAEAALHVYSVAGELCVGQRQLALSTGGDAPSDEQLWSTSTRAAELLADFHRGMMPPIPWLDTLSIQQLEAEHARHGNAVVRRGSPQSAKDPCGAPTAILTLYLPAATTAVFFEPGVARVSDDMKSLLQHSDAADDSCDFTQRPFPDQYTFFKEHNLCEAKAAITSKTQYFLSDSSAPPGPKERHQLASLLRRPPIQLDNVAGAVVTGAGAGGVGGGRLEETRLLWKYRHFICRDGKYFLPFMRCVDWANTHSSERRAACALIYQWARPAFEDVLACLSFYFDHVAPVRQYAVRLLRREGDGRLCQLAFQLVQAVRYDSAEAELANFLVERAVGCWELCSTLYTLLSVEVALEKRRTLSAAGKASDDRHGGRALFEPLLRRLSERLTQQCPHFATRLRQQHAMHRVLQLLSRQLQQSSLDRLGKTALGNKLIAKQACGLRALFSSVHHGMPSRRNVNGSFSSSLMTHSSAGMREEHSMSSARTGDGSEEADANGGDGSSAVEASDVDSAADDEVRRLRFPPLSPQSQGSAPRSPPSQSGAKQQYRSRHASAVDVLDRYGVATLATHPGIPITGLLSDSLYIFKSAKLPMRLTFTALRPAGLAWGGGRGGEPLYGASPSPCLLTPLAMQPAPSQQRSGGLQGMNSSGGGASAAVAAEEQAEGFLGAGEGDTVPLAMMYKYNDDIRQDQLIVQLIRLMDDLLQRDGLQLYLTPYRVIATAPNEGLVEIVPQVTTFFSVQRDVLKYLRVYNSTAELLRQAMDRYTRSFAGYCVITFVLGIGDRHLENILITQDGRLLHIDFGYVLGNDPKPFPPPMKINREMVEVLGGPQSTGFTEFKLYCCSAYNTLRKHAPLLLHILLLGAHTEGMPQVTGEGGDPRVNLLKVQEKLRLDLTNAQATQYLQNVIADSVGSIFTNLWDVLHAAAQATRG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

090_A_3(2X6I)
?
[Raw transfer]



093_A_3(2X6J)
?
[Raw transfer]



EUT_A_2(4UWF)
PK3C3_HUMAN
[Raw transfer]



EM7_A_3(4ANU)
PK3CG_HUMAN
[Raw transfer]



X6K_A_5(2X6K)
?
[Raw transfer]



AJZ_A_3(3LS8)
PK3C3_HUMAN
[Raw transfer]
58 Fugue 74.1928% -19 - C3 -5DFZ - VPS34_YEAST -
30 HHSearch 70.5535% -26 - C3 -4UWH - PK3C3_HUMAN -
22 HHSearch 69.9228% -8 - C3 -5DFZ - VPS34_YEAST -
21 HHSearch 69.3427% -7 - C3 -5KC2 - VPS34_YEAST -
27 HHSearch 68.4427% -31 - C3 -5VLR - PK3CD_HUMAN -
59 Fugue 67.7823% -10 - C3 -4TUU - PK3CA_HUMAN -
29 HHSearch 67.1935% -18 - C3 -2X6K - ? -
24 HHSearch 64.5925% -3 * C3 *4JPS - PK3CA_HUMAN -
57 Fugue 62.1119% -53 - C3 -1E8X - PK3CG_PIG -
61 Fugue 52.4716% 11 - C3 -4JSP - MTOR_HUMAN -
33 HHSearch 49.8018% -25 - C3 -5C46 - PI4KB_HUMAN -
15 PsiBlast_PDB 49.7042% -17 - C3 -2X6H - ? -
14 PsiBlast_PDB 49.3442% -20 - C3 -2X6F - ? -
6 PsiBlast_PDB 49.0442% -20 - C3 -3IHY - PK3C3_HUMAN -
18 PsiBlast_PDB 48.9342% -18 - C3 -2X6K 4.8 ?
16 PsiBlast_PDB 48.9142% -14 - C3 -2X6I 5.2 ?
63 Fugue 48.3315% -0 - C3 -5H64 - MTOR_HUMAN -
17 PsiBlast_PDB 48.3042% -13 - C3 -2X6J 4.5 ?
5 PsiBlast_PDB 48.2042% -18 - C3 -3LS8 5.3 PK3C3_HUMAN
13 PsiBlast_PDB 48.1642% -14 - C3 -5ANL - PK3C3_HUMAN -