@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_24_2410: (2018-03-10 )
MPPKRPQALEKLHVAPHDKAVSITDTMTLVVKGEGGVEMRVKQTGIAQGPGSSSASGQPKSDAVMNKIKFEDLRIGSELGKGSQGKVRVAQHKITGEKYAMKYIAFDGDSDDMRSALEAELRQVAAVKHHNIVSSYEAFFRDGRLYVVLEYMDCGTMNNLIDRHPEGFSEDMLAYIARELFKGLEFLHHLNMIHRDIKPANVLANTKGEIKISDFGVAKTLSGGDLQTLSAQGSVPYMSPERIQSKPYSFNSDIWSAGLTIAECAFREYPFASLKPKVFELCQAIASGTAKINWDDRETKFSDEFKEFIELCLRPEATRPSATEMLSHSLIQKASNVNPLEAGRWMSPKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

YQY_A_2(4ANB)
MP2K1_HUMAN
[Raw transfer]



3OR_A_4(3ORN)
MP2K1_HUMAN
[Raw transfer]



2P7_A_4(4AN9)
MP2K1_HUMAN
[Raw transfer]



CHU_A_4(3WIG)
MP2K1_HUMAN
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



GOL_A_6(4GV1)
AKT1_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
9 PsiBlast_PDB 74.7632% -45 - C1 -4ANB 6.7 MP2K1_HUMAN
8 PsiBlast_PDB 74.2132% -44 - C1 -4AN9 6.5 MP2K1_HUMAN
10 PsiBlast_PDB 73.8932% -52 - C1 -3ORN 8.7 MP2K1_HUMAN
6 PsiBlast_PDB 73.5532% -48 - C1 -4AN2 - MP2K1_HUMAN -
7 PsiBlast_PDB 73.4632% -48 - C1 -4AN3 - MP2K1_HUMAN -
12 PsiBlast_PDB 72.6432% -48 - C1 -3WIG 6.2 MP2K1_HUMAN
11 PsiBlast_PDB 72.4732% -49 - C1 -3OS3 - MP2K1_HUMAN -
15 PsiBlast_PDB 69.0334% -47 - C1 -4QMN - STK24_HUMAN -
13 PsiBlast_PDB 68.4034% -51 - C1 -4QML - STK24_HUMAN -
4 PsiBlast_PDB 68.0232% -47 - C1 -3SLS - MP2K1_HUMAN -
16 PsiBlast_PDB 67.8334% -48 - C1 -4QMO - STK24_HUMAN -
19 PsiBlast_PDB 67.8034% -46 - C1 -4QMS - STK24_HUMAN -
14 PsiBlast_PDB 66.3434% -47 - C1 -4QMM - STK24_HUMAN -
49 Fugue 66.1727% 44 - C1 -3C4Z - RK_BOVIN -
20 PsiBlast_PDB 65.3834% -46 - C1 -4QMT - STK24_HUMAN -
18 PsiBlast_PDB 65.2934% -46 - C1 -4QMQ - STK24_HUMAN -
17 PsiBlast_PDB 65.1434% -49 - C1 -4QMP - STK24_HUMAN -
29 HHSearch 63.3628% -95 - C1 -4XBR - INKA1_HUMAN (first) -
3 PsiBlast_PDB 62.0132% -18 - C1 -5DH3 - STK3_HUMAN -
22 HHSearch 60.0427% -17 - C1 -3C0G - CSKP_HUMAN -