@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_25_1580: (2018-03-10 )
MNPSSKRHAYEPLPQQQQQQHPTNPPPAYQHHRVSTGTGRESPALPQLSPNSMSAVTNIAEPSSSPALISTSAASSNLVPIFQGREDSAAASRRGGDGNSEVHPHPAEVSETYPGASTAAAQSMALAVVPFTGTSGVGVGVSAPQRCDPRVGGADQEGKNTGVGGDDVGYYSGPSPYGKLAPLSLSTERVCPHCLRPYDVFDDGEGVFDPATFFRVDATTRSSSIQPSPSHPKLLPPPSHEGDEQQKQQPSTSPRLYTEGAGDGGAAAGQLLCSRSSTAAGLDDSSSDGTNRSGNYITAVHPPAAAFTSHYFRALPPPSFIIAAGARGASAPLAIEDYRPSPLIGSPRDEKVEARQPFALAPALASDNGGGGGNSSGTLVCKVAAVPHYSYVWPITCTGMRSQVRLLQQGDSSEKTAAEMEGGKEESPSCESGSPVCSPTAATPSPNNGYYRHYFKELRQLGRGTYGGVYLCRHVMCGVNLGEFALKKIPVGDKVTYLQSVLREVRILEEVRRHPNVVEYKHSWVEEAQLADFGPPVRCLFILMEYASAGSLDTYLERYGNNLSTLAVWYFFLSSVAGTAHLHEKHILHRDLKPQNLLLAATKDRPPRVLVSDFGTAALLDDILYDRSGGTGTLEYMAPELLETTASPRGANERYVNHHTMASDVWSLGMVLHYLAFDGALPERHEDGSVNLDKARHSANARPPEMLRLLEAMLQLDPAKRPRCCDILASPMVQSIMRIFNKDDHSQWDLSIQRQQQLSATSPSAILPLERPPRPPVPAPAPRSAPLNALEAHSIDDSSSPRGARSRNAIAAISTSSQGRGVRADSTNLEDKSNTLQSSRVELLSASTLVDLSTAMARAGSSSSSNGSPLAMKLPPPRPSTVISQHGRQQQQRAHVVAGLPKTLASSNTFQFSDSPSPRRVNVGVQTNPVVIVEKQQRHA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



STU_A_2(3A61)
KS6B1_HUMAN
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]
28 HHSearch 67.8526% -93 - C1 -4XBR - INKA1_HUMAN (first) -
34 HHSearch 66.5328% -94 - C1 -5J5T 6.6 M4K3_HUMAN
54 Fugue 65.1718% -2 - C1 -2ACX - GRK6_HUMAN -
29 HHSearch 61.3025%-106 - C1 -2QR8 - -
44 HHSearch 60.8626% -96 - C1 -1KOB - ? -
51 Fugue 60.4222% -31 - C1 -2RIO - IRE1_YEAST -
49 Fugue 53.8118% -62 - C1 -1TKI - TITIN_HUMAN -
27 HHSearch 52.8628% 0 - C- -2WEL - KCC2D_HUMAN -
42 HHSearch 52.6227% 16 - C1 -4B4L - DAPK1_HUMAN -
33 HHSearch 51.5927% 19 - C1 -2X0G - DAPK1_HUMAN -
23 HHSearch 50.9020% -89 - C1 -1TKI - TITIN_HUMAN -
47 Fugue 50.3718% -45 - C1 -4XHG - ? -
25 HHSearch 49.9223% -96 - C1 -2X4F - MYLK4_HUMAN -
50 Fugue 49.5427% -11 - C1 -1BYG - CSK_HUMAN -
21 HHSearch 49.3624% -89 - C1 -4NIF - KS6A1_HUMAN -
46 Fugue 48.3919% 12 - C1 -4AW2 - MRCKA_RAT -
35 HHSearch 48.3327% -29 * C1 *2Y7J - PHKG2_HUMAN -
18 PsiBlast_PDB 47.9732% -4 - C1 -4L42 - KS6B1_HUMAN -
22 HHSearch 47.8824% -43 - C1 -3C0G - CSKP_HUMAN -
30 HHSearch 47.6524% -52 - C1 -1J1B - GSK3B_HUMAN -