@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_26_0050: (2018-03-10 )
MDKYALGPVIGEGQFGSVRMATVKATGQTVAVKLLHVPRLTEGIPHPVARELLIASRVASPFLVKTIEIAPYGSHMAVVMERCMEDLACVLRKCSPAHPLPLLLTQSYMRMLLTALHALHSSGILHRDVKPSNCFVAVDGCLKLGDFGLSRPLCSDMSHEVVSRWYRAPELLFGQRRYGGEVDLWAAGCVFAELLRGHGRPFFTGDGDISQIAKIFDVFGTPTGGTCSFYRQLPDWEKVSFEEKKGTGLRVLLPFVPPEALDLLTKMLALDPASRCSAAEALSHPFFALSDILLRV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HDT_A_2(1OIT)
CDK2_HUMAN
[Raw transfer]



2PU_B_2(1GIJ)
CDK2_HUMAN
[Raw transfer]



DTQ_B_2(1DI8)
CDK2_HUMAN
[Raw transfer]



I17_B_2(1G5S)
CDK2_HUMAN
[Raw transfer]



ATP_E_5(1FIN)
CDK2_HUMAN
[Raw transfer]



1PU_B_2(1GIH)
CDK2_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]



EDO_A_3(1CKP)
CDK2_HUMAN
[Raw transfer]
17 PsiBlast_PDB 93.3336%-144 - C- -1JVP - CDK2_HUMAN -
9 PsiBlast_PDB 92.8136%-148 - C1 -1CKP 3.1 CDK2_HUMAN
11 PsiBlast_PDB 92.2136%-143 - C1 -1DI8 4.1 CDK2_HUMAN
1 PsiBlast_PDB 91.0436%-143 - C1 -1GII - CDK2_HUMAN -
19 PsiBlast_PDB 90.9236%-143 - C1 -1KE5 - CDK2_HUMAN -
20 PsiBlast_PDB 90.4736%-144 - C1 -1KE6 - CDK2_HUMAN -
2 PsiBlast_PDB 89.1636%-140 - C1 -1GIJ 4.1 CDK2_HUMAN
10 PsiBlast_PDB 88.6636% -93 - C1 -1BUH - CDK2_HUMAN -
13 PsiBlast_PDB 87.5036%-104 - C1 -1FVT - CDK2_HUMAN -
15 PsiBlast_PDB 86.5736% -98 - C1 -1JSV - CDK2_HUMAN -
16 PsiBlast_PDB 86.5636%-139 - C1 -1G5S 6.6 CDK2_HUMAN
4 PsiBlast_PDB 86.5136%-142 - C1 -1OIT 6.1 CDK2_HUMAN
3 PsiBlast_PDB 85.7236% -91 - C1 -2DS1 - CDK2_HUMAN -
18 PsiBlast_PDB 85.5536%-143 - C1 -1GIH 4.3 CDK2_HUMAN
6 PsiBlast_PDB 85.5036% -90 - C1 -5UQ2 - CDK2_HUMAN -
8 PsiBlast_PDB 84.7736% -92 - C1 -1FIN 4.2 CDK2_HUMAN
32 HHSearch 84.2734% -83 - C1 -1V0B - CDC2H_PLAFK -
21 HHSearch 83.7535% -70 - C1 -1UNL - CDK5_HUMAN -
31 HHSearch 83.7236% -89 - C1 -5LQF - CDK1_HUMAN -
40 HHSearch 83.6235% 0 - C- -3EB0 - ? -