@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_27_0100: (2018-03-10 )
MDKYEILAQIGDGTFGSVAKAVSKKTGQLVAIKKMKQKFYTWEECVKLPEVDVVRRIHGHPNVVKLREVIRENNELFFVFEYMDGDLLGVIKKAKQQGGPPASTPSAAPLIPYPLVKNYMRQMLQALVYIHKRGYFHRDMKPENLLIRKEASGDEVLKLADFGLVKEICARPPFTDYVSTRWYRAPELLLQDRFYGAAVDVWAAGCIMAELITMRPLFPGTNEVDQLFKIMSVLGSPTEEVWAGGLRLAKKIRYTFPKVAGSGLAQALPSHIPLPALDLLRQMLVYDPKVRLTAEQCLQHPFFNVGIDECNAPSAAALDQLALMAKRMLPGSKTAPPALKSPTAGQVAALKAARASTDASLSDTSSRKFYLLGTLKDPAPSLPKLPVALSTSPPSLDAPPNASSPLRGRGALSPAGMPVLANGHQCPSLTTTVAKGKRRSQETADTSLAKKLAGLKNVPTGKGKLPVSYALPAASAVHSPRAAPNLKVSASVARPYPLAPTANNRDAVASPRHHNPYKEAETTSPTAASAAAKVEIDLDELMEEFASEMTAMGVLAQRHDSGASAESKSESYVSQPALPPDPVATLLNNSRYRRKSTTSADPLLKGNNSPRATHQLDTRKVDDVAAKSDLPRIDHSAPKGMSPSLKALLAKHKTSGLAFP

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EZV_A_2(3EZV)
CDK2_HUMAN
[Raw transfer]



6QB_A_2(5K4J)
CDK2_HUMAN
[Raw transfer]



ATP_A_5(4EOM)
CDK2_HUMAN
[Raw transfer]



107_E_5(1FVV)
CDK2_HUMAN
[Raw transfer]



EZR_A_2(3EZR)
CDK2_HUMAN
[Raw transfer]



LS1_B_2(1KE5)
CDK2_HUMAN
[Raw transfer]



LS2_B_2(1KE6)
CDK2_HUMAN
[Raw transfer]



LS3_B_2(1KE7)
CDK2_HUMAN
[Raw transfer]



1RO_A_5(4EOI)
CDK2_HUMAN
[Raw transfer]



4SP_A_5(2IW8)
CDK2_HUMAN
[Raw transfer]



1RO_A_5(4EOP)
CDK2_HUMAN
[Raw transfer]



ATP_E_5(1FIN)
CDK2_HUMAN
[Raw transfer]



U55_B_2(1JSV)
CDK2_HUMAN
[Raw transfer]



AMP_A_2(3GC0)
?
[Raw transfer]



106_A_2(1FVT)
CDK2_HUMAN
[Raw transfer]



I17_B_2(1G5S)
CDK2_HUMAN
[Raw transfer]



DTQ_B_2(1DI8)
CDK2_HUMAN
[Raw transfer]



1PU_B_2(1GIH)
CDK2_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]



PVB_A_2(1CKP)
CDK2_HUMAN
[Raw transfer]



EDO_A_3(1CKP)
CDK2_HUMAN
[Raw transfer]
40 HHSearch 76.5837%-134 - C1 -3GC0 3.7 ?
2 PsiBlast_PDB 73.1741% -31 - C1 -4EOI 5.8 CDK2_HUMAN
3 PsiBlast_PDB 72.8741% -34 - C1 -4EOM 4.0 CDK2_HUMAN
4 PsiBlast_PDB 72.5541% -31 - C1 -4EOP 6.2 CDK2_HUMAN
1 PsiBlast_PDB 71.1041% -30 - C1 -2IW8 6.9 CDK2_HUMAN
13 PsiBlast_PDB 70.6840% -31 - C1 -1FVV 6.1 CDK2_HUMAN
10 PsiBlast_PDB 69.8640% -41 - C1 -1DI8 6.0 CDK2_HUMAN
54 Fugue 69.0728% 5 - C1 -4AW2 - MRCKA_RAT -
8 PsiBlast_PDB 69.0640% -30 - C1 -1FIN 3.6 CDK2_HUMAN
14 PsiBlast_PDB 68.7940% -35 - C1 -1JSV 4.1 CDK2_HUMAN
12 PsiBlast_PDB 68.2740% -42 - C1 -1FVT 5.2 CDK2_HUMAN
19 PsiBlast_PDB 67.8640% -41 - C1 -1KE6 5.9 CDK2_HUMAN
37 HHSearch 67.4039% -95 - C1 -1UA2 - CDK7_HUMAN -
7 PsiBlast_PDB 67.0040% -40 - C1 -3EZV 7.2 CDK2_HUMAN
5 PsiBlast_PDB 66.5040% -39 - C1 -5K4J 6.7 CDK2_HUMAN
11 PsiBlast_PDB 66.3840% -34 - C1 -1F5Q - CDK2_HUMAN -
16 PsiBlast_PDB 66.1240% -38 - C- -1JVP - CDK2_HUMAN -
18 PsiBlast_PDB 66.0440% -39 - C1 -1KE5 5.8 CDK2_HUMAN
20 PsiBlast_PDB 65.9140% -38 - C1 -1KE7 6.0 CDK2_HUMAN
9 PsiBlast_PDB 65.0440% -35 - C1 -1CKP 5.2 CDK2_HUMAN
17 PsiBlast_PDB 64.1940% -31 - C1 -1GIH 6.8 CDK2_HUMAN
6 PsiBlast_PDB 64.1340% -41 - C1 -3EZR 6.4 CDK2_HUMAN
26 HHSearch 62.3336% -29 - C1 -5BYZ 2.2 MK07_HUMAN
15 PsiBlast_PDB 60.6740% -4 - C1 -1G5S 8.3 CDK2_HUMAN