@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_27_2570: (2018-03-11 )
MSASVNNLDGKLDLVDITALSAAYEPEEVLGEGTYGIVFRARNKATGAKYAIKKLRLDGFSEGVPATTIREATLLHDLNDNPNVVKLLDVVCSDHRVYLVFELLDEDLRSFIKRYRPVSGQKPTNGTAVPLHLVREFTRQILYALWTCHNNRILHRDLKPGNILVANYRSKNGETKFYVKLADFGLARMFEMSVQTYTHEVMTLWYRSPEIILGDRHYTPAADVWSVGCIVAEMILGYSLFRGENWRDQLDKVFYVVGTPTEQTWPGVTKLPGYDRNFKVYHVAPLPTRLRDYDEKAVEFIAYLLVTNPKLRPTIPEILEHPFMKDA

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EZV_A_2(3EZV)
CDK2_HUMAN
[Raw transfer]



LS1_B_2(1KE5)
CDK2_HUMAN
[Raw transfer]



6QB_A_2(5K4J)
CDK2_HUMAN
[Raw transfer]



LS3_B_2(1KE7)
CDK2_HUMAN
[Raw transfer]



LS2_B_2(1KE6)
CDK2_HUMAN
[Raw transfer]



EZR_A_2(3EZR)
CDK2_HUMAN
[Raw transfer]



107_E_5(1FVV)
CDK2_HUMAN
[Raw transfer]



1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]



ADP_A_9(3QHW)
CDK2_HUMAN
[Raw transfer]



106_A_2(1FVT)
CDK2_HUMAN
[Raw transfer]



U55_B_2(1JSV)
CDK2_HUMAN
[Raw transfer]



DTQ_B_2(1DI8)
CDK2_HUMAN
[Raw transfer]



AMP_A_2(3GC0)
?
[Raw transfer]



1PU_B_2(1GIH)
CDK2_HUMAN
[Raw transfer]



RRC_A_5(1UNL)
CDK5_HUMAN
[Raw transfer]



ATP_E_5(1FIN)
CDK2_HUMAN
[Raw transfer]



I17_B_2(1G5S)
CDK2_HUMAN
[Raw transfer]



Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]



PVB_A_2(1CKP)
CDK2_HUMAN
[Raw transfer]



MPD_A_4(4YC3)
CDK1_HUMAN
[Raw transfer]



EDO_A_3(1CKP)
CDK2_HUMAN
[Raw transfer]
26 HHSearch 94.1547%-145 - C1 -4EK4 4.3 CDK2_HUMAN
10 PsiBlast_PDB 93.1044%-149 - C1 -1DI8 6.1 CDK2_HUMAN
8 PsiBlast_PDB 93.0144%-153 - C1 -1CKP 4.9 CDK2_HUMAN
19 PsiBlast_PDB 92.8644%-151 - C1 -1KE6 5.9 CDK2_HUMAN
9 PsiBlast_PDB 92.2244%-148 - C1 -1BUH - CDK2_HUMAN -
20 PsiBlast_PDB 91.6444%-148 - C1 -1KE7 5.7 CDK2_HUMAN
6 PsiBlast_PDB 90.9844%-149 - C1 -5K4J 6.5 CDK2_HUMAN
18 PsiBlast_PDB 90.5544%-149 - C1 -1KE5 5.9 CDK2_HUMAN
24 HHSearch 90.2747%-134 - C1 -3QHW 6.6 CDK2_HUMAN
16 PsiBlast_PDB 90.1444%-149 - C- -1JVP - CDK2_HUMAN -
12 PsiBlast_PDB 90.0444%-150 - C1 -1FVT 5.5 CDK2_HUMAN
27 HHSearch 90.0244%-138 - C1 -1V0B - CDC2H_PLAFK -
14 PsiBlast_PDB 89.8844%-144 - C1 -1JSV 3.8 CDK2_HUMAN
4 PsiBlast_PDB 89.1744%-136 - C1 -5UQ2 - CDK2_HUMAN -
21 HHSearch 88.8142%-133 * C1 *5LQF - CDK1_HUMAN -
13 PsiBlast_PDB 88.4744%-135 - C1 -1FVV 6.4 CDK2_HUMAN
11 PsiBlast_PDB 88.4544%-138 - C1 -1F5Q - CDK2_HUMAN -
7 PsiBlast_PDB 88.0044%-131 - C1 -1FIN 3.1 CDK2_HUMAN
25 HHSearch 87.5842%-132 - C1 -4YC3 2.9 CDK1_HUMAN
1 PsiBlast_PDB 87.1744%-145 - C1 -3EZR 6.8 CDK2_HUMAN
17 PsiBlast_PDB 86.1844%-145 - C1 -1GIH 6.4 CDK2_HUMAN
15 PsiBlast_PDB 81.1444%-140 - C1 -1G5S 8.1 CDK2_HUMAN
40 HHSearch 69.2541% -88 - C1 -4AU8 5.2 CDK5_HUMAN
32 HHSearch 68.8540% -95 - C1 -1UNL 6.6 CDK5_HUMAN
29 HHSearch 56.6434% -26 - C1 -5BYZ 2.2 MK07_HUMAN