@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_29_2140: (2018-03-11 )
MAQAAYPPSREGSYPHSRSGGPRANPMLPEQMIGSYVIRETIGRGSFGKVKKGRHVHTGEYVAIKILNRQKLKSANMDKKIHREIEILQLFSHPNICRLYEVISTPTDMYLIMEYVEGGELYDYIVQKGRVRESEARYIFQQIVCAIEYCHHFRVVHRDLKPENILLGTGLQVKLIDFGLSNITKDGEFLATSCGSPNYAAPEVISGKLYFGPEVDVWSCGVILYALLCGCLPFDEDSIPLLFSKIKKGKYAIPSNMQTGPRELIQQILVVDPLVRLTVPQIRDNAWFNQRLPMRLSYSESIFSVKEDRILSVLVSETAKRLGVRDRDVRKELELGYGAAFVAYNILLDARRRREIAAEVRELGMSGDESRGVSHVIGAQQTKFQPKATERELNMGLMLTQSPAMVVLLDEEDATRNKWAYNRGCFVPASVATLGDPTKVSDTSLSDGSGNGGPGGSIAVGSFRITSKMCSGSLVGSGSVGSSSYAPGSLRGAAGLTGGSSSYRRAGMQSSTGGTAASQLGANLSDQPRVGSVARKHAMYTAEEEQFIVENNYGWRIGIMTDWRAEQALSAIYDVLRTFKMQWKVVSPFRLLARSTAETWSVMADSTQSRNASTRRNTLSTYSVESSAPIRIGCRSGAPGSGSSDDHEDGDIAGSMQRDEECIHAHITRTRRAGAAARSFGSAPGGGFNTSSSQVARGNYFGGLQGGDEEAAIVSGSAASGVLQSAHAIESGSESTSSPRDPRGASPPASAAASTSAIAEPASSPANPVVISLYFFRIHERHDKGYLVDFKVVRNAMVAADLVLLLSDTLVRKLG

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6PV_A_2(5K00)
MELK_HUMAN
[Raw transfer]



6Z5_A_3(5KZ8)
MARK2_HUMAN
[Raw transfer]



6Z2_A_3(5KZ7)
MARK2_HUMAN
[Raw transfer]



24R_A_3(5EAK)
MARK2_HUMAN
[Raw transfer]



TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]



B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]



STU_A_4(4RER)
AAPK1_HUMAN
[Raw transfer]



16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]



EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]
2 PsiBlast_PDB 93.0252%-139 - C1 -5EZV - AAPK1_HUMAN (first) -
1 PsiBlast_PDB 92.3053%-137 - C1 -5ISO - ? -
30 HHSearch 83.5550%-141 - C1 -4RED - AAPK1_HUMAN -
4 PsiBlast_PDB 82.9960%-150 - C1 -2YZA - AAPK2_HUMAN -
5 PsiBlast_PDB 82.9660%-141 - C1 -3AQV 5.2 AAPK2_HUMAN
32 HHSearch 82.6560%-140 - C1 -3AQV 5.2 AAPK2_HUMAN
27 HHSearch 77.3642%-116 - C1 -2QNJ - MARK3_HUMAN -
29 HHSearch 76.6550%-134 - C1 -4RED - AAPK1_HUMAN -
9 PsiBlast_PDB 76.2555%-152 - C1 -3DAE - SNF1_YEAST -
6 PsiBlast_PDB 76.2348%-127 - C1 -4RER 7.4 AAPK1_HUMAN
23 HHSearch 74.2339%-132 - C1 -5K00 12.1 MELK_HUMAN
26 HHSearch 73.9942%-113 - C- -3FE3 - MARK3_HUMAN -
10 PsiBlast_PDB 73.0955%-157 - C1 -3HYH - SNF1_YEAST -
7 PsiBlast_PDB 72.4849%-131 - C1 -4RED - AAPK1_HUMAN -
41 HHSearch 71.7254%-158 - C1 -3HYH - SNF1_YEAST -
11 PsiBlast_PDB 71.2350%-129 - C1 -2QNJ - MARK3_HUMAN -
14 PsiBlast_PDB 68.5049%-142 - C1 -5KZ8 8.1 MARK2_HUMAN
18 PsiBlast_PDB 67.7348%-151 - C1 -1ZMV - MARK2_RAT -
17 PsiBlast_PDB 66.4349%-124 - C- -3FE3 - MARK3_HUMAN -
12 PsiBlast_PDB 66.2649%-143 - C- -2R0I - MARK2_RAT -
13 PsiBlast_PDB 66.0549%-150 - C1 -5KZ7 8.3 MARK2_HUMAN
15 PsiBlast_PDB 64.5049%-129 - C1 -5EAK 7.6 MARK2_HUMAN
42 HHSearch 45.1131% -59 - C1 -2X4F 6.0 MYLK4_HUMAN