@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_29_2600: (2018-03-11 )
MSRYQCSLCQLETLENDLNFCVCCRAAVCAKCTLACYPNRKSVGLCVRCTPPDYGFACGRCRRHISYGDIEFFCDMCAVPICFTCVASGTSFECGQLKCSLCCECPMSQAPRNLVVRHEVDDAMLRQLPIPLVSSATPLAAPPPQARAAAAAVAATKSTKYRKLFGREKLGEGAQGVVYKCHTEENEVVVVKEMVFNDTDVTAFEAQARQVERMRQLNHPHLIRYLDVSVQKDPLRICVVMPFYSEGDLKKFIERQRKPVTEVKLCSIVLQIAGALNYLHRQEPPLVHRDIKPENILLLNHEEQVLLMDLDLCRTVDVTASVIKRRELSPTYEYRAPELEKSHGDTKADVFSLGVVMFVLATLPDFPCVRTDSGEMLVFSASKWSPSSLKRAIQREIRRVQRYTYSEEFIRLVVAMLVHQPAARPTSGAVIYRLQKIMEQRLMEGKE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(4EOM)
CDK2_HUMAN
[Raw transfer]



ATP_A_6(4EOO)
CDK2_HUMAN
[Raw transfer]



N20_A_5(1OI9)
CDK2_HUMAN
[Raw transfer]



N41_A_5(1OIY)
CDK2_HUMAN
[Raw transfer]



N76_A_5(1OIU)
CDK2_HUMAN
[Raw transfer]



ST8_A_5(1OGU)
CDK2_HUMAN
[Raw transfer]



ADP_A_4(3NIZ)
?
[Raw transfer]



HDT_A_2(1OIT)
CDK2_HUMAN
[Raw transfer]



75X_A_5(4CFV)
CDK2_HUMAN
[Raw transfer]



2WC_A_5(4CFU)
CDK2_HUMAN
[Raw transfer]



1RO_A_5(4EON)
CDK2_HUMAN
[Raw transfer]



1RO_A_5(4EOP)
CDK2_HUMAN
[Raw transfer]



JYM_A_5(4CFN)
CDK2_HUMAN
[Raw transfer]
28 HHSearch 71.8322%-124 - C1 -4HCU - -
34 HHSearch 68.9322%-120 - C1 -3T9T - -
30 HHSearch 66.3220%-121 - C1 -4Y95 - ? -
25 HHSearch 63.0420%-119 - C1 -5T18 - -
21 HHSearch 62.4523% -7 * C1 *2PSQ - -
38 HHSearch 62.1020%-130 - C1 -5P9J - -
31 HHSearch 60.9627% 22 - C1 -4CKJ - -
40 HHSearch 60.9226% 16 - C1 -5AMN - -
39 HHSearch 55.3925% -5 - C1 -4AT5 - -
37 HHSearch 55.0222% 1 - C1 -1YVJ - -
29 HHSearch 54.7624% -11 - C1 -5O2C - WNK3_HUMAN -
5 PsiBlast_PDB 53.0828% -2 - C1 -5O1V - WNK3_HUMAN -
49 Fugue 53.0418% -4 - C1 -4EUT - TBK1_HUMAN -
22 HHSearch 52.5520% -31 - C1 -3BKB - -
35 HHSearch 51.7422% 2 - C1 -3TT0 - FGFR1_HUMAN -
51 Fugue 51.0324% - - C1 -3H4J - SNF1_SCHPO -
23 HHSearch 50.9020% -30 - C1 -3CBL - -
26 HHSearch 50.3121% 8 - C1 -4ASE - -
9 PsiBlast_PDB 49.6027% -61 - C1 -3NIZ 4.4 ?
6 PsiBlast_PDB 48.5928% 5 - C1 -5O21 - WNK3_HUMAN -
10 PsiBlast_PDB 47.8033% -14 - C1 -4EON 4.7 CDK2_HUMAN
13 PsiBlast_PDB 41.7632% -12 - C1 -1OIT 5.1 CDK2_HUMAN