@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_30_1780: (2018-03-11 )
MAHLFFTGACAAAAVLPTSDREEVSPVWSIYDDYCCSASQNAEVNDPQVEGGGVGNCGGTALPRLPLISGPVPSMTLKGAQLKKEAPIRRGAQGAVYSALDVATSAPAEDENAKGLFSQEACRGHDGEEQVADGGQRPARRGRRVAVKRIFIQASDFGARDISATVLREVTLHRFVSEKQAACLAAAGTSYSTASASDATARAEDDQGQALCNLIDDSARVIHLYRVVEAPHKEMCLVMELAATNLEQVVFPHGARGAQRGDGAGGYMRKPGVVSLFGSSASIGVGGGLGLSSASLSTAPDAATADAGPQASPPSPPPSRMPLVRYVMRRLLRLVCFLHETCRVVHRDLKLSNVLVSKDAGLRLGDFGSARFIPPLRSATKTGCENSPSVLKPPAAPAGQREHLLCTPPSIRTTLHYRPPEALLGDQVCRTAADVWALGVIFAQLLLQKGLFRSESELDLLGGIQKLLGMPTYSAPPSWLGAPPVPGPPRDRESAAHIPAPQASLPYKFHAGVVPADGLDLLSRMLHQQPECRITAREALQHPFLNLEGLSALATHDDDERGRVLWEERVATVLREQATGPIYGMGRGERRPMLISLADNEDEEDQEDDEDGAAPFCVDLGGCTSY

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4WE_A_2(5BYZ)
MK07_HUMAN
[Raw transfer]



404_A_2(3PJ8)
CDK2_HUMAN
[Raw transfer]



EDO_A_3(1CKP)
CDK2_HUMAN
[Raw transfer]



1PU_B_2(1GII)
CDK2_HUMAN
[Raw transfer]



EZV_A_2(3EZV)
CDK2_HUMAN
[Raw transfer]



EZR_A_2(3EZR)
CDK2_HUMAN
[Raw transfer]



SU9_B_2(1PF8)
CDK2_HUMAN
[Raw transfer]



GOL_A_2(1H01)
CDK2_HUMAN
[Raw transfer]



DTQ_B_2(1DI8)
CDK2_HUMAN
[Raw transfer]



ATP_E_5(1FIN)
CDK2_HUMAN
[Raw transfer]



HDT_A_2(1OIT)
CDK2_HUMAN
[Raw transfer]



6QB_A_2(5K4J)
CDK2_HUMAN
[Raw transfer]



2PU_B_2(1GIJ)
CDK2_HUMAN
[Raw transfer]



FAL_A_4(1H01)
CDK2_HUMAN
[Raw transfer]
47 HHSearch 82.4326% -84 - C1 -5LXC - DYRK2_HUMAN -
34 HHSearch 82.0627% -90 - C1 -4AZF - DYRK2_HUMAN -
26 HHSearch 79.6128%-119 - C1 -1UA2 - CDK7_HUMAN -
39 HHSearch 70.3727% 0 - C- -3EB0 - ? -
25 HHSearch 68.8729% -27 - C1 -5BYZ 6.1 MK07_HUMAN
21 HHSearch 66.2625% -46 - C1 -1J1B - GSK3B_HUMAN -
43 HHSearch 61.9529% -30 - C1 -2Y7J - PHKG2_HUMAN -
27 HHSearch 55.5723% -73 * C1 *3C0G - CSKP_HUMAN -
46 HHSearch 54.5523% -50 - C1 -2BDW - KCC2D_CAEEL -
36 HHSearch 54.1825% -64 - C1 -4XBR - INKA1_HUMAN (first) -
32 HHSearch 54.1023% -70 - C1 -3C0I - CSKP_HUMAN -
29 HHSearch 54.0422% -85 - C1 -5K00 - MELK_HUMAN -
45 HHSearch 53.9923% -51 - C1 -1KOB - ? -
5 PsiBlast_PDB 53.3432%-103 - C1 -3EZV 3.7 CDK2_HUMAN
2 PsiBlast_PDB 52.9832%-109 - C1 -1GIJ 3.4 CDK2_HUMAN
4 PsiBlast_PDB 52.5932%-113 - C1 -3EZR 3.4 CDK2_HUMAN
49 Fugue 51.6919% -32 - C1 -1TKI - TITIN_HUMAN -
22 HHSearch 50.7421% -38 - C1 -1TKI - TITIN_HUMAN -
15 PsiBlast_PDB 50.5432% -79 - C1 -1OIT 5.6 CDK2_HUMAN
3 PsiBlast_PDB 50.5232% -73 - C1 -2DS1 - CDK2_HUMAN -
12 PsiBlast_PDB 19.4032% -29 - C1 -1H01 4.7 CDK2_HUMAN