@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_30_2930: (2018-03-11 )
MASNAAANGSFGSSANAVQLVSTQRGRKVYCVRGQSFDIDDNYTVTSVIGHGAYGVVCAALDDRTFQEVAIKRVSRVFEDLIDGRRIWREILLLRILKECGCRNVLRLIRVLPPRDPIMEFRDLYLVTDLYDIDLFSIIRQNKCESIDLLRRISVRVLRCLADMHSMGIVHRDIKPSNILLRDEKNAEEAIVCDFGLARAGLHRLSEPLDLTDYVVTRWYRPPELLLMCPYSYPIDIWAVGCVMAEYAMQRPLFAGRDYIHQLQFVLSSIPITGVDFIERSSSSSGLANMNEIAKKYKGTRPLPQLLSKLPKDGLELVTEMLAFEPNKRITAQEALKHPFFSSVGGPDCKSYPAPPELDLGFDMHAEVSECQLRRAIWDELQYYRK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

YIX_A_2(2YIX)
MK14_HUMAN
[Raw transfer]



ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]



ANP_B_7(4QNY)
?
[Raw transfer]



P7B_A_2(3P7B)
MK14_MOUSE
[Raw transfer]



P5K_A_3(3P5K)
MK14_MOUSE
[Raw transfer]



GK6_A_2(3D83)
MK14_HUMAN
[Raw transfer]



P78_A_3(3P78)
MK14_MOUSE
[Raw transfer]



GOL_B_5(4QNY)
?
[Raw transfer]



G11_A_2(3IPH)
MK14_HUMAN
[Raw transfer]



P7A_A_3(3P7A)
MK14_MOUSE
[Raw transfer]



GOL_A_6(4ZSG)
MK07_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]



P79_A_3(3P79)
MK14_MOUSE
[Raw transfer]



GOL_B_7(3N9X)
?
[Raw transfer]



4WE_A_2(5BYZ)
MK07_HUMAN
[Raw transfer]



R4L_A_2(4B99)
MK07_HUMAN
[Raw transfer]



4WG_A_2(5BYY)
MK07_HUMAN
[Raw transfer]



P7C_A_3(3P7C)
MK14_MOUSE
[Raw transfer]



CQ8_A_3(4ZZN)
MK01_HUMAN
[Raw transfer]



TT4_A_2(4XNE)
MK01_RAT
[Raw transfer]



4R0_A_6(4ZSJ)
MK07_HUMAN
[Raw transfer]



BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]
21 HHSearch 96.7335% -62 - C1 -5BYZ 2.4 MK07_HUMAN
7 PsiBlast_PDB 93.9136% -72 - C1 -5BYY 7.3 MK07_HUMAN
4 PsiBlast_PDB 93.8836% -82 - C1 -4ZSG 2.3 MK07_HUMAN
1 PsiBlast_PDB 93.8134% -33 - C1 -4O2Z - ? -
5 PsiBlast_PDB 93.6235% -84 - C1 -4IC7 5.7 MK07_HUMAN
3 PsiBlast_PDB 93.5436% -76 - C1 -5BYZ 8.1 MK07_HUMAN
9 PsiBlast_PDB 92.0636% -80 - C1 -4ZSJ 4.9 MK07_HUMAN
2 PsiBlast_PDB 91.0236% -90 - C1 -4B99 8.1 MK07_HUMAN
24 HHSearch 90.5436% -82 - C1 -3N9X 2.5 ?
23 HHSearch 89.5835% -96 - C1 -5CI6 - MPK6_ARATH -
29 HHSearch 89.5433% -42 - C1 -4O2Z - ? -
26 HHSearch 89.5334% -80 - C1 -3COI - MK13_HUMAN -
33 HHSearch 88.9233% -81 - C1 -4XNE 4.3 MK01_RAT
28 HHSearch 88.5034% -82 - C1 -4YNO - MK13_HUMAN -
39 HHSearch 87.5935% -96 - C1 -2YIX 8.6 MK14_HUMAN
44 HHSearch 86.8432% -90 - C1 -4H36 - MK10_HUMAN -
25 HHSearch 86.4133% -83 - C1 -4ZZN 6.0 MK01_HUMAN
8 PsiBlast_PDB 85.2336% -8 - C1 -5CI6 - MPK6_ARATH -
45 HHSearch 84.0034% -25 - C1 -4QNY 5.2 ?
11 PsiBlast_PDB 82.9237% -94 - C1 -3IPH 5.8 MK14_HUMAN