@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_31_1560: (2018-03-11 )
MLRSGALCKALSSPASLPEASATVSSRGSAADHSIPVSAPVFIDAFEDLTTAKPSLHREPHISSSKSPNELERRRRCYHGTQPCEQVLFTPPVRETVISEEEELSLLHARRMCSSDAQLGTTQAACAWRPASPEFTDLVPFLASQSPLEPLCSSEPAAVAPLSLNATRRASPRDATTDTAAAPTTSGDSSKITMATVSSLTVHTDSNTGRALHSRTSSLLYYSPHIHYDGNSESLETEAALHSSHAAISSSISCFHASSLVTPRALPSYPLSSSSRNSMALTKLQAESSRSEGNRSSSPTGTCGGAACIISDALALTHEKPDHLLLRALASEEGAYVPPLSTFTTTQCTIPPITAPQAEKQNVNTKSGFAPSVPSIRLPVAYSIPVSDSERSLASIPALGYGPRSTPNACSLTSARSGPSARSARHSNRCTSTLRNGVPTLKELFPTLPDELYLTRDRLCISHDSKRRLGSGAYGIVQQAELYPPGVEAPRMFTPTSESAASTSIPSTPCFSPANGRVSIHSFSSIAAAVGNHENVAGASNGGYFGAEQTGRPGAMALAAKTSGNIHFRTVSMFSSDSVTASALPLHQQPYNGQTASFYNGVDDMVRWSSAVESVKDLPWGHALSLNNDATPNMTTAQATVLSPTSGSHETPAFDAVSTASSEGQHSASQSSSVERPLHCKTTAATTMDFNCQTQNDLRLPAVLGLRLGHNPDLRVSPRTSLPVSSGHLSGRVCGAATAVDDAGESTVCTGICEEGRDCLASVIESVRPSRGEGEAVDGETEPWAQHSMTSRTGRGAFALPHSPVGGGRAYRSSSMRVWRRVACGRGNESEGSGLRTYPSFTSPTIHEVSMGTSSAAAVEGKQTPCCEMVVPPATVDAYLHRFLSRTADLVSSKFVDHVDAADHTVREAAVVGADANDKAQAEGYGCLPSALPRALEDREEGGEYEPAEKTSATPERRGPESRRQRMQESLEMSRSSFLVSISYAEHELTCSDAGDETLTLTAQQAIEGAIREAQEEHQHAMDQTPEGTEKTPGAGLRLRLKGHDISCAGSEAQSEMRSDGEAATTTSTDVVLAAAAGEAERMAQRFTHLSTGTSAPASTAMAKSTNAGFFGPRTHVGGGVGGDAILGGHVTPSSTSNSWTPSGTAPIGASAAASAMSATSITRPGNLGGALVSGGTNNTLQSSFDFPRTPAVHHDMKPSMVSDALSSGAVPFRSVATKVIEKVDLTRNAMKLNAFHNELRMASRLRHPCLVNMFGVAEDAKHFYLVMDLAEKGNLAQYQQRFGVRATREMAPQFTADVVLALEYLRDGSQHSYWVTPPPDSTDDSLLQDHRHCTSRTLGMRGSAGEASAAEPRGLPGSTSAHLLRQATESASAATVSKRLSLSAPTTPPLPSQHTGATDATDNVGADACSSVSAVRLVPRESMSESSESPLRTSSTAFGHEPPVPAHTATLPRQQDDNGRSVAQQDSIIVHRDLKPENLLLTWDFHVKLADFGDACFYGDNEANNFGGTPSYISPEVFARCKASPYSDLWALGCVLYELLVGERLFSGSLVEVGTAVQQFKPEALIFPDTLTSTMADSLTAKGRDARERGTGSAAGIAEAAKDLVRQLLQPVPEERLGSAERGGFDALKAHPFFADISWDKVLQTTNMTTTNTNYTAELAEYLEPTEAVVYCSPVKLLPTVEGSSSKEHLSTKSGGTNSRSTQIALVMALTDAPRLLLVNLDLHMVQFEIPWSTELCVSVLRTERFTVTVPFSDVLRSPSIPVPGSTLPPTTTAETSPMHSSSNFSAAAANTITYTFSDCNGRADLWGVKIHHLQSMCSAKLESGSAAGRSLPRLYSTPVVPTAGGAFHLPRSSASSQQLKHQRRRDTPTLSPRAGRRFLQWPRTTPRTMRAGSLGSLTFSSNERSIGAPRDMRSTAATGTCAALSSDACGCTLSARITPATRTRATSSSHRISVSQSSAFTVSSAAAATPCTPSVMLHSSDMLQPPSLTGAALPSFHRGSATVTVTIASSNTSDSPRGSLNTWKANVGDSESVSSPKSPLEFDCTQSTACARPAAPPPLCSTASTSANTPGVSPTNTTAIPIGGEDSPQCGGNVSEARWNGYFLTPATSTCASTGALHPLSASATATYASGSVPESALGCSSSVGNVTPHLAFCSGPRCGGEGLLSNSFEVTHEALSQGEGTPGPWNTPTQADSTTGTPGTPGVLRLPSVCRDKEEGGAVGGGAPIIALAETAPAAAAAAAKLPIKRSQARQQYHGAQKMKSKPCSAAATSSTAEVALEKR

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

07U_A_2(3TXO)

[Raw transfer]



MP6_A_3(3NAY)
PDPK1_HUMAN
[Raw transfer]



3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]



39Z_D_4(2PE0)
PDPK1_HUMAN
[Raw transfer]



3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]



517_D_4(2PE1)
PDPK1_HUMAN
[Raw transfer]



464_E_5(2PE2)
PDPK1_HUMAN
[Raw transfer]



ATP_A_2(4AW0)
PDPK1_HUMAN
[Raw transfer]



JMZ_A_12(3NUN)
PDPK1_HUMAN
[Raw transfer]



JNZ_A_6(3NUS)
PDPK1_HUMAN
[Raw transfer]



ATP_A_2(4CT2)
PDPK1_HUMAN
[Raw transfer]



ATP_A_15(1H1W)
PDPK1_HUMAN
[Raw transfer]



GOL_A_3(1UU9)
PDPK1_HUMAN
[Raw transfer]



JOZ_A_16(3NUU)
PDPK1_HUMAN
[Raw transfer]



SYP_A_2(3PWY)
PDPK1_HUMAN
[Raw transfer]



ATP_A_2(4XX9)
PDPK1_HUMAN
[Raw transfer]



GOL_A_7(1Z5M)
PDPK1_HUMAN
[Raw transfer]



ATP_A_2(4CT1)
PDPK1_HUMAN
[Raw transfer]



ATP_A_2(3HRF)
PDPK1_HUMAN
[Raw transfer]



GOL_A_8(1UVR)
PDPK1_HUMAN
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



LI8_A_4(1Z5M)
PDPK1_HUMAN
[Raw transfer]



ATP_A_2(3HRC)
PDPK1_HUMAN
[Raw transfer]



MP7_A_2(3NAX)
PDPK1_HUMAN
[Raw transfer]



JPZ_A_9(3NUY)
PDPK1_HUMAN
[Raw transfer]
35 HHSearch 77.4135% -56 - C1 -5LVO - PDPK1_HUMAN -
32 HHSearch 73.1835% -46 - C1 -1UVR - PDPK1_HUMAN -
22 HHSearch 69.8230% -40 - C1 -4GV1 - AKT1_HUMAN -
28 HHSearch 68.9729% -74 - C1 -3WF7 - KS6B1_HUMAN -
24 HHSearch 65.5630% -64 - C1 -2VD5 - DMPK_HUMAN -
50 Fugue 62.2425% 8 - C1 -4AW2 - MRCKA_RAT -
52 Fugue 60.3023% 7 - C1 -5KCV - AKT1_HUMAN -
21 HHSearch 57.2725% -70 * C1 *2X4F - MYLK4_HUMAN -
47 Fugue 56.4219% 35 - C1 -3C4Z - RK_BOVIN -
38 HHSearch 56.1127% -37 - C1 -1VZO - KS6A5_HUMAN -
43 HHSearch 53.8623% -70 - C1 -5J5T 5.0 M4K3_HUMAN
48 Fugue 53.0317% 31 - C1 -2ACX - GRK6_HUMAN -
40 HHSearch 52.6225% 4 - C1 -2X0G - DAPK1_HUMAN -
45 HHSearch 49.2025% -9 - C1 -5O2C - WNK3_HUMAN -
10 PsiBlast_PDB 48.5836%-112 - C1 -3NUU 4.2 PDPK1_HUMAN
7 PsiBlast_PDB 47.7136%-111 - C1 -2PE2 4.0 PDPK1_HUMAN
8 PsiBlast_PDB 47.6936%-106 - C1 -3NAY 3.6 PDPK1_HUMAN
46 Fugue 47.6417% 3 - C1 -1KOB - ? -
5 PsiBlast_PDB 47.6336%-108 - C1 -2PE0 4.4 PDPK1_HUMAN
11 PsiBlast_PDB 47.1236%-108 - C1 -3NUY 4.8 PDPK1_HUMAN
6 PsiBlast_PDB 46.9236%-106 - C1 -2PE1 4.6 PDPK1_HUMAN
1 PsiBlast_PDB 45.8736%-102 - C1 -3PWY 4.0 PDPK1_HUMAN
3 PsiBlast_PDB 45.5936%-105 - C1 -1UU9 2.7 PDPK1_HUMAN
4 PsiBlast_PDB 45.4236%-103 - C1 -1Z5M 3.5 PDPK1_HUMAN
12 PsiBlast_PDB 44.8636%-107 - C1 -3NUN 3.3 PDPK1_HUMAN
37 HHSearch 44.5535% -77 - C1 -3TXO 3.4
14 PsiBlast_PDB 37.6336% -18 - C1 -4CT2 4.4 PDPK1_HUMAN
17 PsiBlast_PDB 37.5936% -19 - C1 -4AW0 4.9 PDPK1_HUMAN
15 PsiBlast_PDB 36.7636% -13 - C1 -1H1W 4.7 PDPK1_HUMAN
16 PsiBlast_PDB 36.7236% -24 - C1 -1UVR 2.6 PDPK1_HUMAN
19 PsiBlast_PDB 36.6436% -26 - C1 -3HRC 4.6 PDPK1_HUMAN
20 PsiBlast_PDB 36.4536% -17 - C1 -3HRF 4.5 PDPK1_HUMAN
13 PsiBlast_PDB 36.2936% -15 - C1 -4CT1 4.4 PDPK1_HUMAN
18 PsiBlast_PDB 36.0036% -20 - C1 -4XX9 4.5 PDPK1_HUMAN
2 PsiBlast_PDB 32.0536% -20 - C1 -3NAX 5.7 PDPK1_HUMAN