@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_31_3070: (2018-03-12 )
MEEQDQRKPNGGNNGLPVPPSTTETGQGPLQDILGRTPNCQYVKKRLLGQGSFGSAWRVEESATGNVFAAKVMDLNSMSEKDRGFVTNEVKCLSRCCNPHVVRCENAIEREGQLLIVMEYADGGDLYKQIKARVREMKFFREHEVVFIFLQLCLALDHIHSNKMMHRDLKTANILLTTTGLVKLGDFGFSRQYEDSLSNAVGSTFCGTPYYLSPELWHRQPYSKKSEMWALGVVLYEVMALRRPFTGKNMDELITNICHGRRSDLPSSYSASLRDVCNRLLSVDSNTRPTIHELFHEPFIRSNLETLKRSVEKHNRIPADVREAIARCITQSLNTEEPPAHLEEPEPLIGTVKRHTALRGWQKCLLSFDKKQISIRDPSGVDPEEVVPVATLTSVCPIDVMMAGEEFVFAMKNQAGKAFWFMAPTQRAYEQWLTTLQEAAP

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



ATP_A_2(4XBR)
INKA1_HUMAN
[Raw transfer]



SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]



NU6_A_2(5M51)
NEK2_HUMAN
[Raw transfer]



4SP_A_2(5M57)
NEK2_HUMAN
[Raw transfer]



ACP_A_3(2Z7Q)
KS6A1_HUMAN
[Raw transfer]



ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]



P01_A_2(2Z7S)
KS6A1_HUMAN
[Raw transfer]



CK7_A_3(4B9D)
NEK1_HUMAN
[Raw transfer]



2NS_A_2(4NW6)
KS6A3_HUMAN
[Raw transfer]



STU_A_2(2Z7R)
KS6A1_HUMAN
[Raw transfer]



WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



584_A_3(5D9K)
KS6A3_HUMAN
[Raw transfer]



2NR_A_2(4NW5)
KS6A3_HUMAN
[Raw transfer]



ED8_A_2(2XNO)
NEK2_HUMAN
[Raw transfer]



2NK_A_2(4NUS)
KS6A3_HUMAN
[Raw transfer]



5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]



ADP_A_2(2WQN)
NEK7_HUMAN
[Raw transfer]



EDO_A_17(2XNO)
NEK2_HUMAN
[Raw transfer]
2 PsiBlast_PDB 86.5436%-140 - C1 -4B9D 4.3 NEK1_HUMAN
1 PsiBlast_PDB 86.2836%-140 - C1 -4APC - NEK1_HUMAN -
28 HHSearch 73.8831% -61 - C1 -2BDW - KCC2D_CAEEL -
46 Fugue 71.3424% -16 - C1 -1KOB - ? -
47 Fugue 68.5922% -38 - C1 -1TKI - TITIN_HUMAN -
21 HHSearch 67.6025% -61 - C1 -1TKI - TITIN_HUMAN -
31 HHSearch 67.0230% 0 - C1 -2Y7J - PHKG2_HUMAN -
30 HHSearch 66.9430% -2 - C1 -2Y7J - PHKG2_HUMAN -
23 HHSearch 66.3531% 0 - C- -2WEL - KCC2D_HUMAN -
12 PsiBlast_PDB 66.3234% -47 - C1 -2WQN 4.6 NEK7_HUMAN
8 PsiBlast_PDB 65.9036% -21 - C1 -2W5B 4.6 NEK2_HUMAN
3 PsiBlast_PDB 65.7536% -36 - C1 -2W5A 4.7 NEK2_HUMAN
34 HHSearch 65.7228% -72 - C1 -5J5T - M4K3_HUMAN -
38 HHSearch 65.6829% -76 - C1 -4XBR 4.8 INKA1_HUMAN (first)
35 HHSearch 65.4028%-111 * C1 *5K00 - MELK_HUMAN -
13 PsiBlast_PDB 64.3434% -43 - C1 -5DE2 - NEK7_HUMAN -
25 HHSearch 63.6029% -27 - C1 -3C0I - CSKP_HUMAN -
45 HHSearch 62.6629% -21 - C1 -4GV1 6.3 AKT1_HUMAN
24 HHSearch 62.6429% -20 - C1 -3C0G - CSKP_HUMAN -
11 PsiBlast_PDB 61.9934% -45 - C1 -2WQM - NEK7_HUMAN -
6 PsiBlast_PDB 61.4836% -17 - C1 -5M51 4.0 NEK2_HUMAN
4 PsiBlast_PDB 59.2136% -21 - C1 -2XNO 4.6 NEK2_HUMAN