@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_32_0860: (2018-03-12 )
MIRNATIPAYIQSSPNHSNHNNMSLSLSLQKQKDANADGEDYADGRRILMHNPLKGHLFSSTSDSSLHSSIGQPEMIAAASSSVQKGSSGAGNRLDTALGFCGEETAQGLVAEQVEGPCDEKHVNLIEVRAIDSDDDPSSLEEQEHQVCCTIPSLPAVAFIMCFGAIIVGLLGFLPFYFVGVQSNAHTTEYLLSEAMKGVASITQNSLAMLPAFVHIVTFNYIKRHNTTLEETNLPQDPDQLLVSLLTVLTRFNEAISYLRFVYEGGLYTNAGYTDPKPTDANQTRKIYGGYSRTHNTVPMLEMYNESVTAVEPPNVLGYFDFHREVTLPEGAMNQIVKTWVADPQNNTRWLLASDNTTPTYFNFVMPFTVNGSLGYFAAGSSSDTIIEETTTLVSFLRKNGRIFLVDATRNIVVGNSWNQSVQSRTEDSAIGATIYTPTRIYEITEPIILAAMQVVNESGSLTEVLKDKDTALITFRYKGNNAFLNLTKVKDSYGLDLVLGVVVVRADFEKAFSTARTAAFTVTVLVVVIAAVVAVVIAWFVVREMKRLIPQLIRASNLEVSRGDGKDHRVQGWLAYITEIRGIHEAFVRVERSLREMRTFVPAAVMTLAPSDGSHSDADLADGKTRRVRTRFNANIVKDNTNEFSRVDVAMVLVDVHRAMDTTEACFIMDIISQRAEEYTGYIESVSSSSFFVNFGTQSQNPLVVSKICRFALEVYQSVPDFMRNRVVCFAVRMPFLVGTCGARHSKARVVFDTQRMLDISKVLWDIGCHVASTTDTLSHFATSSAQIPWYRIDCVRFPDEVSQVTLCELRDPRSSLQDNEDMPKKMGDGLSKMCKGEYKQALMIFDSAHSENVQLKRLRKICIDRIASGDTSKYIHLIQDVYALDATPSNHEDMAVGGGAAMYDYDAGSPAGVATSSGEVCDPSNEPPLLACSSFENGAGMPAPVLSQPAAHASPPVAPHTTPICHSKTSPTPSVTTGGEAAEPSHLTERAVTAAMGPREFPPCGASQVVGASGAGPGLPPFHPRTPGATTTAASVPGSSPPWGARDDNASEAPSFLTNAFVFDSSMASADAVGATVQAADEPQVLRDVNQHEWQVSLYPIGSGAFSFIYLGMSDDGVQVAIKRIPRLHRGIKEEEMVSEVCTCAKLRHPNIVPYISCCVTQSYLAIIMEYMPGGSLHDIIDNFGKLPRTVVRRFMLDIVNGLAYLHESTTHGDVKPHNILLGVDGVCKLSDFGSASDRLTEACCVNEDRLMRGTAVYISPEGARNLPLTSASDIYSLGISFLEMVLGRLPWKWADPESTDELPLRHDHEFVQCLTANAIVVDIPDDLDNDMRELALASCAENPEKRPTAQELLSFAFLI

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(2YEX)
CHK1_HUMAN
[Raw transfer]



ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



4T3_A_3(4ZY4)
PAK1_HUMAN
[Raw transfer]



4T5_A_3(4ZY5)
PAK1_HUMAN
[Raw transfer]



X4Z_A_3(4O0R)
PAK1_HUMAN
[Raw transfer]



ANP_A_3(5DBX)
STK39_MOUSE
[Raw transfer]



59N_A_3(5DEW)
PAK1_HUMAN
[Raw transfer]



STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]



59T_A_3(5DEY)
PAK1_HUMAN
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



ANP_A_5(3DAK)
OXSR1_HUMAN
[Raw transfer]



FLL_A_2(3FXZ)
?
[Raw transfer]



2OL_A_3(4O0T)
PAK1_HUMAN
[Raw transfer]



YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]



XR1_A_2(4EQC)
PAK1_HUMAN
[Raw transfer]



DW1_A_2(3FY0)
PAK1_HUMAN
[Raw transfer]
53 Fugue 78.4823% -60 - C1 -5KCV - AKT1_HUMAN -
16 PsiBlast_PDB 73.6026% -99 - C1 -5CEP - M3K12_HUMAN -
15 PsiBlast_PDB 71.6126%-105 - C1 -5CEO - M3K12_HUMAN -
17 PsiBlast_PDB 70.5626% -97 - C1 -5CEQ - M3K12_HUMAN -
51 Fugue 70.2819% -17 - C1 -4BTF - MLKL_MOUSE -
14 PsiBlast_PDB 69.9026% -81 - C- -5CEN - M3K12_HUMAN -
6 PsiBlast_PDB 68.8031% -66 - C1 -5IME - PAK1_HUMAN -
7 PsiBlast_PDB 67.9631% -33 - C1 -5DEY 9.4 PAK1_HUMAN
35 HHSearch 67.5730% -32 - C1 -3DAK - OXSR1_HUMAN -
11 PsiBlast_PDB 66.8931% -34 - C1 -4DAW - PAK1_HUMAN -
8 PsiBlast_PDB 66.7931% -33 - C1 -5DEW 8.9 PAK1_HUMAN
9 PsiBlast_PDB 66.7331% -32 - C1 -3FXZ 7.3 ?
13 PsiBlast_PDB 66.7231% -34 - C1 -4EQC 9.3 PAK1_HUMAN
50 Fugue 66.6117% 23 - C1 -2ACX - GRK6_HUMAN -
20 PsiBlast_PDB 66.1531% -32 - C1 -4ZY5 6.0 PAK1_HUMAN
1 PsiBlast_PDB 65.7228% -48 - C1 -3DAK 4.3 OXSR1_HUMAN
12 PsiBlast_PDB 65.6531% -32 - C1 -5DFP - PAK1_HUMAN -
4 PsiBlast_PDB 65.6331% -32 - C1 -4O0R 6.7 PAK1_HUMAN
10 PsiBlast_PDB 65.5431% -37 - C1 -3FY0 5.3 PAK1_HUMAN
5 PsiBlast_PDB 65.1331% -28 - C1 -4O0T 8.2 PAK1_HUMAN
19 PsiBlast_PDB 64.4831% -31 - C1 -4ZY4 5.6 PAK1_HUMAN