@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_33_1930: (2018-03-12 )
MHPEDGLGTSGAAPISASEALHSFGGCLTAYERKEIVQYETIHYVGQRCVDKMGSPTNGRNDGYDTEEGEYIFRVKDHIAYRYEILKELGSGAFGQVFKAIDHLDSSIVAVKMIRNQRKVLQQAEQEIHMLQHVNDRDPKGLYGIVRMTDNFKFRGHTCVSYELLGANLYEYLKANNFFPMTLSLIRSIAARVLVALTFLARENIIHCDLKPENILLRDNDPSVVKVIDLGSASFDVKNMYTYIQSRFYRAPEVIMEQKYDKAIDWWSFGCILCELANGDPVFPGEDEKDQLGCIMEYLGPPPQSFVEASSARRRREFFDERYKPRPRTTCKGKQREPGSRSLAKFVAVSEDDDFLSFVRLFLQWEPSKRVPPREAMKHRWICGEFVFPNQSEEKPELSSLTKESNGSAAGSLKACMPQEPAAPLKTEASTSTTVGQPFTARGAPADLLSPSAAHQRVQRPAPLPQPPTACTSRANCNALSGDGVISVDTLPCSRDASASTETRGAARLTDAKVQRPPAQRRQSGRLQRGRQRRSTDMADVEMPGEAITSPNHSTSLHAPWDAEESSAEQRTREFIIAANSASSPSSSACGTATRATNARPHEVRLANRVLSSEVLSAAILRSSANPIIFTSRGRNAHSPENKASPNASHSKITNGGAVGNARGGDSAGDVHTGVLELRQKYADSKTKAGTVDLVDRSGSVIAFDSLSRWPNTAGKTQLGGRRQGSASAPDRLDSRGRTSPGVSTESPRGQPRGERREYSINLDAATLPPTEVYQPAAVKGSLHAGEYMLPSELQPFSEDGRSSSPHDVEVAPKCRLLAAMMSEPRDKSEKSQLSLQPRGSSPPSSSGPSAVATPSLRPQYTRRQRSTQCSMLAMRDGGAAHAAARSQRSVAGAAAPMSWKRPAVQPSDVPLVPPRQTLTQRSLLPQRNGAGTRGGDVGKPSTTPTPQLPSLKRYSAH

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(3LLT)
?
[Raw transfer]




D15_A_4(2WO6)
DYR1A_HUMAN
[Raw transfer]




3RA_A_2(4AZF)
DYRK2_HUMAN
[Raw transfer]




3RA_A_2(4AZF)
DYRK2_HUMAN
[Raw transfer]




IRB_A_2(3KVW)
DYRK2_HUMAN
[Raw transfer]




7A7_A_3(5LXD)
DYRK2_HUMAN
[Raw transfer]




7AA_A_3(5LXC)
DYRK2_HUMAN
[Raw transfer]




6FB_A_9(5J1W)
CLK1_HUMAN
[Raw transfer]




GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]




7AA_A_3(5LXC)
DYRK2_HUMAN
[Raw transfer]




DBQ_A_2(1Z57)
CLK1_HUMAN
[Raw transfer]




4E3_A_16(4YLL)
DYR1A_HUMAN
[Raw transfer]




1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]




3 PsiBlast_PDB 93.1841% -83 - C1 -3KVW 7.5 DYRK2_HUMAN
2 PsiBlast_PDB 92.9941% -80 - C1 -5LXD 6.4 DYRK2_HUMAN
22 HHSearch 92.2143% -81 - C1 -4AZF 6.1 DYRK2_HUMAN
5 PsiBlast_PDB 91.9341% -76 - C1 -3K2L - DYRK2_HUMAN -
1 PsiBlast_PDB 91.6941% -80 - C1 -5LXC 7.2 DYRK2_HUMAN
4 PsiBlast_PDB 91.5741% -81 - C1 -4AZF 6.1 DYRK2_HUMAN
21 HHSearch 91.1942% -80 - C1 -5LXC 7.2 DYRK2_HUMAN
6 PsiBlast_PDB 74.9438% -49 - C1 -3ANQ - DYR1A_HUMAN -
8 PsiBlast_PDB 74.6038% -47 - C1 -4NCT - DYR1A_HUMAN -
13 PsiBlast_PDB 74.5738% -48 - C1 -5A4T - DYR1A_HUMAN -
24 HHSearch 74.3140% -54 * C1 *4YU2 - DYR1A_HUMAN -
17 PsiBlast_PDB 74.0838% -52 - C1 -5AIK - DYR1A_HUMAN -
19 PsiBlast_PDB 73.7338% -49 - C1 -4MQ2 - DYR1A_HUMAN -
20 PsiBlast_PDB 73.6138% -53 - C1 -4YLJ - DYR1A_HUMAN -
16 PsiBlast_PDB 73.3238% -50 - C1 -2WO6 7.3 DYR1A_HUMAN
7 PsiBlast_PDB 73.1438% -49 - C1 -3ANR - DYR1A_HUMAN -
14 PsiBlast_PDB 73.0838% -44 - C1 -5A54 - DYR1A_HUMAN -
23 HHSearch 73.0539% -54 - C1 -4YLL 6.3 DYR1A_HUMAN
9 PsiBlast_PDB 72.5138% -49 - C1 -5A3X - DYR1A_HUMAN -
11 PsiBlast_PDB 72.4838% -50 - C1 -5A4L - DYR1A_HUMAN -
31 HHSearch 67.0635% -38 - C1 -1Z57 5.2 CLK1_HUMAN